Gene : Gorai.010G107700 G. raimondii v2.1
Defline:  (1 of 2) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE Genomic Order:  1077
Name:  ? Gorai.010G107700 Secondary Identifier:  ? PAC:26761088
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-695 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G107700 0.5kb upstream 0.5kb upstream 6503 true Chr10: 19928257-19934759 Gossypium raimondii
Gorai.010G107700 0.5kb upstream 0.5kb upstream 500 false Chr10: 19928257-19928756 Gossypium raimondii
Gorai.010G107700 0.5kb downstream 0.5kb downstream 6503 true Chr10: 19928757-19935259 Gossypium raimondii
Gorai.010G107700 0.5kb downstream 0.5kb downstream 500 false Chr10: 19934760-19935259 Gossypium raimondii
Gorai.010G107700 1.0kb upstream 1.0kb upstream 7003 true Chr10: 19927757-19934759 Gossypium raimondii
Gorai.010G107700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 19927757-19928756 Gossypium raimondii
Gorai.010G107700 1.0kb downstream 1.0kb downstream 7003 true Chr10: 19928757-19935759 Gossypium raimondii
Gorai.010G107700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 19934760-19935759 Gossypium raimondii
Gorai.010G107700 2.0kb upstream 2.0kb upstream 8003 true Chr10: 19926757-19934759 Gossypium raimondii
Gorai.010G107700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 19926757-19928756 Gossypium raimondii
Gorai.010G107700 2.0kb downstream 2.0kb downstream 8003 true Chr10: 19928757-19936759 Gossypium raimondii
Gorai.010G107700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 19934760-19936759 Gossypium raimondii
Gorai.010G107700 5.0kb upstream 5.0kb upstream 11003 true Chr10: 19923757-19934759 Gossypium raimondii
Gorai.010G107700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 19923757-19928756 Gossypium raimondii
Gorai.010G107700 5.0kb downstream 5.0kb downstream 11003 true Chr10: 19928757-19939759 Gossypium raimondii
Gorai.010G107700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 19934760-19939759 Gossypium raimondii
Gorai.010G107700 10.0kb upstream 10.0kb upstream 16003 true Chr10: 19918757-19934759 Gossypium raimondii
Gorai.010G107700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 19918757-19928756 Gossypium raimondii
Gorai.010G107700 10.0kb downstream 10.0kb downstream 16003 true Chr10: 19928757-19944759 Gossypium raimondii
Gorai.010G107700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 19934760-19944759 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824759 5264 Brassicales-Malvales View MSA
124347076 5266 SBM View MSA
124246521 5268 Malvidae View MSA
124074147 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain