Gene : Gorai.010G185300 G. raimondii v2.1
Defline:  (1 of 17) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1853
Name:  ? Gorai.010G185300 Secondary Identifier:  ? PAC:26756615
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G185300 0.5kb upstream 0.5kb upstream 3082 true Chr10: 53641524-53644605 Gossypium raimondii
Gorai.010G185300 0.5kb upstream 0.5kb upstream 500 false Chr10: 53641524-53642023 Gossypium raimondii
Gorai.010G185300 0.5kb downstream 0.5kb downstream 3082 true Chr10: 53642024-53645105 Gossypium raimondii
Gorai.010G185300 0.5kb downstream 0.5kb downstream 500 false Chr10: 53644606-53645105 Gossypium raimondii
Gorai.010G185300 1.0kb upstream 1.0kb upstream 3582 true Chr10: 53641024-53644605 Gossypium raimondii
Gorai.010G185300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 53641024-53642023 Gossypium raimondii
Gorai.010G185300 1.0kb downstream 1.0kb downstream 3582 true Chr10: 53642024-53645605 Gossypium raimondii
Gorai.010G185300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 53644606-53645605 Gossypium raimondii
Gorai.010G185300 2.0kb upstream 2.0kb upstream 4582 true Chr10: 53640024-53644605 Gossypium raimondii
Gorai.010G185300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 53640024-53642023 Gossypium raimondii
Gorai.010G185300 2.0kb downstream 2.0kb downstream 4582 true Chr10: 53642024-53646605 Gossypium raimondii
Gorai.010G185300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 53644606-53646605 Gossypium raimondii
Gorai.010G185300 5.0kb upstream 5.0kb upstream 7582 true Chr10: 53637024-53644605 Gossypium raimondii
Gorai.010G185300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 53637024-53642023 Gossypium raimondii
Gorai.010G185300 5.0kb downstream 5.0kb downstream 7582 true Chr10: 53642024-53649605 Gossypium raimondii
Gorai.010G185300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 53644606-53649605 Gossypium raimondii
Gorai.010G185300 10.0kb upstream 10.0kb upstream 12582 true Chr10: 53632024-53644605 Gossypium raimondii
Gorai.010G185300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 53632024-53642023 Gossypium raimondii
Gorai.010G185300 10.0kb downstream 10.0kb downstream 12582 true Chr10: 53642024-53654605 Gossypium raimondii
Gorai.010G185300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 53644606-53654605 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123811514 5264 Brassicales-Malvales Singleton cluster - no MSA
124351148 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain