Gene : Gorai.010G167000 G. raimondii v2.1
Defline:  (1 of 3) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  1670
Name:  ? Gorai.010G167000 Secondary Identifier:  ? PAC:26760281
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5173 Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PYRUVDEHYD-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G167000 0.5kb upstream 0.5kb upstream 3263 true Chr10: 48507940-48511202 Gossypium raimondii
Gorai.010G167000 0.5kb upstream 0.5kb upstream 500 false Chr10: 48510703-48511202 Gossypium raimondii
Gorai.010G167000 0.5kb downstream 0.5kb downstream 3263 true Chr10: 48507440-48510702 Gossypium raimondii
Gorai.010G167000 0.5kb downstream 0.5kb downstream 500 false Chr10: 48507440-48507939 Gossypium raimondii
Gorai.010G167000 1.0kb upstream 1.0kb upstream 3763 true Chr10: 48507940-48511702 Gossypium raimondii
Gorai.010G167000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48510703-48511702 Gossypium raimondii
Gorai.010G167000 1.0kb downstream 1.0kb downstream 3763 true Chr10: 48506940-48510702 Gossypium raimondii
Gorai.010G167000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48506940-48507939 Gossypium raimondii
Gorai.010G167000 2.0kb upstream 2.0kb upstream 4763 true Chr10: 48507940-48512702 Gossypium raimondii
Gorai.010G167000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48510703-48512702 Gossypium raimondii
Gorai.010G167000 2.0kb downstream 2.0kb downstream 4763 true Chr10: 48505940-48510702 Gossypium raimondii
Gorai.010G167000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48505940-48507939 Gossypium raimondii
Gorai.010G167000 5.0kb upstream 5.0kb upstream 7763 true Chr10: 48507940-48515702 Gossypium raimondii
Gorai.010G167000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48510703-48515702 Gossypium raimondii
Gorai.010G167000 5.0kb downstream 5.0kb downstream 7763 true Chr10: 48502940-48510702 Gossypium raimondii
Gorai.010G167000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48502940-48507939 Gossypium raimondii
Gorai.010G167000 10.0kb upstream 10.0kb upstream 12763 true Chr10: 48507940-48520702 Gossypium raimondii
Gorai.010G167000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48510703-48520702 Gossypium raimondii
Gorai.010G167000 10.0kb downstream 10.0kb downstream 12763 true Chr10: 48497940-48510702 Gossypium raimondii
Gorai.010G167000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48497940-48507939 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840734 5264 Brassicales-Malvales View MSA
124338432 5266 SBM View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain