Gene : Gorai.010G238200 G. raimondii v2.1
Defline:  (1 of 3) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  2382
Name:  ? Gorai.010G238200 Secondary Identifier:  ? PAC:26760443
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5173 Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PYRUVDEHYD-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G238200 0.5kb upstream 0.5kb upstream 3781 true Chr10: 60803261-60807041 Gossypium raimondii
Gorai.010G238200 0.5kb upstream 0.5kb upstream 500 false Chr10: 60803261-60803760 Gossypium raimondii
Gorai.010G238200 0.5kb downstream 0.5kb downstream 3781 true Chr10: 60803761-60807541 Gossypium raimondii
Gorai.010G238200 0.5kb downstream 0.5kb downstream 500 false Chr10: 60807042-60807541 Gossypium raimondii
Gorai.010G238200 1.0kb upstream 1.0kb upstream 4281 true Chr10: 60802761-60807041 Gossypium raimondii
Gorai.010G238200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 60802761-60803760 Gossypium raimondii
Gorai.010G238200 1.0kb downstream 1.0kb downstream 4281 true Chr10: 60803761-60808041 Gossypium raimondii
Gorai.010G238200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 60807042-60808041 Gossypium raimondii
Gorai.010G238200 2.0kb upstream 2.0kb upstream 5281 true Chr10: 60801761-60807041 Gossypium raimondii
Gorai.010G238200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 60801761-60803760 Gossypium raimondii
Gorai.010G238200 2.0kb downstream 2.0kb downstream 5281 true Chr10: 60803761-60809041 Gossypium raimondii
Gorai.010G238200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 60807042-60809041 Gossypium raimondii
Gorai.010G238200 5.0kb upstream 5.0kb upstream 8281 true Chr10: 60798761-60807041 Gossypium raimondii
Gorai.010G238200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 60798761-60803760 Gossypium raimondii
Gorai.010G238200 5.0kb downstream 5.0kb downstream 8281 true Chr10: 60803761-60812041 Gossypium raimondii
Gorai.010G238200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 60807042-60812041 Gossypium raimondii
Gorai.010G238200 10.0kb upstream 10.0kb upstream 13281 true Chr10: 60793761-60807041 Gossypium raimondii
Gorai.010G238200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 60793761-60803760 Gossypium raimondii
Gorai.010G238200 10.0kb downstream 10.0kb downstream 13281 true Chr10: 60803761-60817041 Gossypium raimondii
Gorai.010G238200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 60807042-60817041 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840734 5264 Brassicales-Malvales View MSA
124338432 5266 SBM View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain