Gene : Gorai.006G000800 G. raimondii v2.1
Defline:  (1 of 9) PF05699//PF14372 - hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) // Domain of unknown function (DUF4413) (DUF4413) Genomic Order:  8
Name:  ? Gorai.006G000800 Secondary Identifier:  ? PAC:26829753
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G000800 0.5kb upstream 0.5kb upstream 5459 true Chr06: 234084-239542 Gossypium raimondii
Gorai.006G000800 0.5kb upstream 0.5kb upstream 500 false Chr06: 239043-239542 Gossypium raimondii
Gorai.006G000800 0.5kb downstream 0.5kb downstream 5459 true Chr06: 233584-239042 Gossypium raimondii
Gorai.006G000800 0.5kb downstream 0.5kb downstream 500 false Chr06: 233584-234083 Gossypium raimondii
Gorai.006G000800 1.0kb upstream 1.0kb upstream 5959 true Chr06: 234084-240042 Gossypium raimondii
Gorai.006G000800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 239043-240042 Gossypium raimondii
Gorai.006G000800 1.0kb downstream 1.0kb downstream 5959 true Chr06: 233084-239042 Gossypium raimondii
Gorai.006G000800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 233084-234083 Gossypium raimondii
Gorai.006G000800 2.0kb upstream 2.0kb upstream 6959 true Chr06: 234084-241042 Gossypium raimondii
Gorai.006G000800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 239043-241042 Gossypium raimondii
Gorai.006G000800 2.0kb downstream 2.0kb downstream 6959 true Chr06: 232084-239042 Gossypium raimondii
Gorai.006G000800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 232084-234083 Gossypium raimondii
Gorai.006G000800 5.0kb upstream 5.0kb upstream 9959 true Chr06: 234084-244042 Gossypium raimondii
Gorai.006G000800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 239043-244042 Gossypium raimondii
Gorai.006G000800 5.0kb downstream 5.0kb downstream 9959 true Chr06: 229084-239042 Gossypium raimondii
Gorai.006G000800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 229084-234083 Gossypium raimondii
Gorai.006G000800 10.0kb upstream 10.0kb upstream 14959 true Chr06: 234084-249042 Gossypium raimondii
Gorai.006G000800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 239043-249042 Gossypium raimondii
Gorai.006G000800 10.0kb downstream 10.0kb downstream 14959 true Chr06: 224084-239042 Gossypium raimondii
Gorai.006G000800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 224084-234083 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841078 5264 Brassicales-Malvales View MSA
124322837 5266 SBM View MSA
124248242 5268 Malvidae View MSA
124071055 5270 Rosid View MSA
123752994 5271 Pentapetalae View MSA
122797909 5272 Eudicot View MSA
122048190 5273 Angiosperm View MSA
121350578 5274 Embryophyte View MSA
123381805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain