Gene : Gorai.006G011500 G. raimondii v2.1
Defline:  (1 of 1) PTHR11468:SF8 - ALPHA-GLUCAN PHOSPHORYLASE 1 Genomic Order:  115
Name:  ? Gorai.006G011500 Secondary Identifier:  ? PAC:26831379
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7238 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G011500 0.5kb upstream 0.5kb upstream 9985 true Chr06: 2483500-2493484 Gossypium raimondii
Gorai.006G011500 0.5kb upstream 0.5kb upstream 500 false Chr06: 2492985-2493484 Gossypium raimondii
Gorai.006G011500 0.5kb downstream 0.5kb downstream 9985 true Chr06: 2483000-2492984 Gossypium raimondii
Gorai.006G011500 0.5kb downstream 0.5kb downstream 500 false Chr06: 2483000-2483499 Gossypium raimondii
Gorai.006G011500 1.0kb upstream 1.0kb upstream 10485 true Chr06: 2483500-2493984 Gossypium raimondii
Gorai.006G011500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2492985-2493984 Gossypium raimondii
Gorai.006G011500 1.0kb downstream 1.0kb downstream 10485 true Chr06: 2482500-2492984 Gossypium raimondii
Gorai.006G011500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2482500-2483499 Gossypium raimondii
Gorai.006G011500 2.0kb upstream 2.0kb upstream 11485 true Chr06: 2483500-2494984 Gossypium raimondii
Gorai.006G011500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2492985-2494984 Gossypium raimondii
Gorai.006G011500 2.0kb downstream 2.0kb downstream 11485 true Chr06: 2481500-2492984 Gossypium raimondii
Gorai.006G011500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2481500-2483499 Gossypium raimondii
Gorai.006G011500 5.0kb upstream 5.0kb upstream 14485 true Chr06: 2483500-2497984 Gossypium raimondii
Gorai.006G011500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2492985-2497984 Gossypium raimondii
Gorai.006G011500 5.0kb downstream 5.0kb downstream 14485 true Chr06: 2478500-2492984 Gossypium raimondii
Gorai.006G011500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2478500-2483499 Gossypium raimondii
Gorai.006G011500 10.0kb upstream 10.0kb upstream 19485 true Chr06: 2483500-2502984 Gossypium raimondii
Gorai.006G011500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2492985-2502984 Gossypium raimondii
Gorai.006G011500 10.0kb downstream 10.0kb downstream 19485 true Chr06: 2473500-2492984 Gossypium raimondii
Gorai.006G011500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2473500-2483499 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834148 5264 Brassicales-Malvales View MSA
124350391 5266 SBM View MSA
124253620 5268 Malvidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain