Gene : Gorai.N001700 G. raimondii v2.1
Defline:  (1 of 2) PTHR22536//PTHR22536:SF2 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  17
Name:  ? Gorai.N001700 Secondary Identifier:  ? PAC:26777970
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.N001700 0.5kb upstream 0.5kb upstream 5919 true scaffold_14: 393078-398996 Gossypium raimondii
Gorai.N001700 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 393078-393577 Gossypium raimondii
Gorai.N001700 0.5kb downstream 0.5kb downstream 5919 true scaffold_14: 393578-399496 Gossypium raimondii
Gorai.N001700 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 398997-399496 Gossypium raimondii
Gorai.N001700 1.0kb upstream 1.0kb upstream 6419 true scaffold_14: 392578-398996 Gossypium raimondii
Gorai.N001700 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 392578-393577 Gossypium raimondii
Gorai.N001700 1.0kb downstream 1.0kb downstream 6419 true scaffold_14: 393578-399996 Gossypium raimondii
Gorai.N001700 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 398997-399996 Gossypium raimondii
Gorai.N001700 2.0kb upstream 2.0kb upstream 7419 true scaffold_14: 391578-398996 Gossypium raimondii
Gorai.N001700 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 391578-393577 Gossypium raimondii
Gorai.N001700 2.0kb downstream 2.0kb downstream 7419 true scaffold_14: 393578-400996 Gossypium raimondii
Gorai.N001700 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 398997-400996 Gossypium raimondii
Gorai.N001700 5.0kb upstream 5.0kb upstream 10419 true scaffold_14: 388578-398996 Gossypium raimondii
Gorai.N001700 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 388578-393577 Gossypium raimondii
Gorai.N001700 5.0kb downstream 5.0kb downstream 10419 true scaffold_14: 393578-403996 Gossypium raimondii
Gorai.N001700 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 398997-403996 Gossypium raimondii
Gorai.N001700 10.0kb upstream 10.0kb upstream 15419 true scaffold_14: 383578-398996 Gossypium raimondii
Gorai.N001700 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 383578-393577 Gossypium raimondii
Gorai.N001700 10.0kb downstream 10.0kb downstream 15419 true scaffold_14: 393578-408996 Gossypium raimondii
Gorai.N001700 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 398997-408996 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123814419 5264 Brassicales-Malvales Singleton cluster - no MSA
124310915 5266 SBM Singleton cluster - no MSA
124160295 5268 Malvidae Singleton cluster - no MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain