Gene : Gorai.N002100 G. raimondii v2.1
Defline:  (1 of 2) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  21
Name:  ? Gorai.N002100 Secondary Identifier:  ? PAC:26777950
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-101 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.N002100 0.5kb upstream 0.5kb upstream 1716 true scaffold_14: 661339-663054 Gossypium raimondii
Gorai.N002100 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 661339-661838 Gossypium raimondii
Gorai.N002100 0.5kb downstream 0.5kb downstream 1716 true scaffold_14: 661839-663554 Gossypium raimondii
Gorai.N002100 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 663055-663554 Gossypium raimondii
Gorai.N002100 1.0kb upstream 1.0kb upstream 2216 true scaffold_14: 660839-663054 Gossypium raimondii
Gorai.N002100 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 660839-661838 Gossypium raimondii
Gorai.N002100 1.0kb downstream 1.0kb downstream 2216 true scaffold_14: 661839-664054 Gossypium raimondii
Gorai.N002100 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 663055-664054 Gossypium raimondii
Gorai.N002100 2.0kb upstream 2.0kb upstream 3216 true scaffold_14: 659839-663054 Gossypium raimondii
Gorai.N002100 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 659839-661838 Gossypium raimondii
Gorai.N002100 2.0kb downstream 2.0kb downstream 3216 true scaffold_14: 661839-665054 Gossypium raimondii
Gorai.N002100 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 663055-665054 Gossypium raimondii
Gorai.N002100 5.0kb upstream 5.0kb upstream 6216 true scaffold_14: 656839-663054 Gossypium raimondii
Gorai.N002100 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 656839-661838 Gossypium raimondii
Gorai.N002100 5.0kb downstream 5.0kb downstream 6216 true scaffold_14: 661839-668054 Gossypium raimondii
Gorai.N002100 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 663055-668054 Gossypium raimondii
Gorai.N002100 10.0kb upstream 10.0kb upstream 11216 true scaffold_14: 651839-663054 Gossypium raimondii
Gorai.N002100 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 651839-661838 Gossypium raimondii
Gorai.N002100 10.0kb downstream 10.0kb downstream 11216 true scaffold_14: 661839-673054 Gossypium raimondii
Gorai.N002100 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 663055-673054 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
123838077 5264 Brassicales-Malvales View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain