Gene : Gorai.006G038900 G. raimondii v2.1
Defline:  (1 of 6) PTHR10836:SF59 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC1, CYTOSOLIC Genomic Order:  389
Name:  ? Gorai.006G038900 Secondary Identifier:  ? PAC:26833274
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ANAEROFRUCAT-PWY Gossypium raimondii pathologic  
Graimondii ANAGLYCOLYSIS-PWY Gossypium raimondii pathologic  
Graimondii GLUCONEO-PWY Gossypium raimondii pathologic  
Graimondii PWY-1042 Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PWY66-399 Gossypium raimondii pathologic  
Graimondii SUCSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G038900 0.5kb upstream 0.5kb upstream 3850 true Chr06: 10788539-10792388 Gossypium raimondii
Gorai.006G038900 0.5kb upstream 0.5kb upstream 500 false Chr06: 10788539-10789038 Gossypium raimondii
Gorai.006G038900 0.5kb downstream 0.5kb downstream 3850 true Chr06: 10789039-10792888 Gossypium raimondii
Gorai.006G038900 0.5kb downstream 0.5kb downstream 500 false Chr06: 10792389-10792888 Gossypium raimondii
Gorai.006G038900 1.0kb upstream 1.0kb upstream 4350 true Chr06: 10788039-10792388 Gossypium raimondii
Gorai.006G038900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10788039-10789038 Gossypium raimondii
Gorai.006G038900 1.0kb downstream 1.0kb downstream 4350 true Chr06: 10789039-10793388 Gossypium raimondii
Gorai.006G038900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10792389-10793388 Gossypium raimondii
Gorai.006G038900 2.0kb upstream 2.0kb upstream 5350 true Chr06: 10787039-10792388 Gossypium raimondii
Gorai.006G038900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10787039-10789038 Gossypium raimondii
Gorai.006G038900 2.0kb downstream 2.0kb downstream 5350 true Chr06: 10789039-10794388 Gossypium raimondii
Gorai.006G038900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10792389-10794388 Gossypium raimondii
Gorai.006G038900 5.0kb upstream 5.0kb upstream 8350 true Chr06: 10784039-10792388 Gossypium raimondii
Gorai.006G038900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10784039-10789038 Gossypium raimondii
Gorai.006G038900 5.0kb downstream 5.0kb downstream 8350 true Chr06: 10789039-10797388 Gossypium raimondii
Gorai.006G038900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10792389-10797388 Gossypium raimondii
Gorai.006G038900 10.0kb upstream 10.0kb upstream 13350 true Chr06: 10779039-10792388 Gossypium raimondii
Gorai.006G038900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10779039-10789038 Gossypium raimondii
Gorai.006G038900 10.0kb downstream 10.0kb downstream 13350 true Chr06: 10789039-10802388 Gossypium raimondii
Gorai.006G038900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10792389-10802388 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840158 5264 Brassicales-Malvales View MSA
124346732 5266 SBM View MSA
124250703 5268 Malvidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain