Gene : Gorai.006G144600 G. raimondii v2.1
Defline:  (1 of 1) PTHR14969:SF3 - DIHYDROSPHINGOSINE 1-PHOSPHATE PHOSPHATASE LCB3-RELATED Genomic Order:  1446
Name:  ? Gorai.006G144600 Secondary Identifier:  ? PAC:26829950
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRIGLSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G144600 0.5kb upstream 0.5kb upstream 4975 true Chr06: 40285697-40290671 Gossypium raimondii
Gorai.006G144600 0.5kb upstream 0.5kb upstream 500 false Chr06: 40290172-40290671 Gossypium raimondii
Gorai.006G144600 0.5kb downstream 0.5kb downstream 4975 true Chr06: 40285197-40290171 Gossypium raimondii
Gorai.006G144600 0.5kb downstream 0.5kb downstream 500 false Chr06: 40285197-40285696 Gossypium raimondii
Gorai.006G144600 1.0kb upstream 1.0kb upstream 5475 true Chr06: 40285697-40291171 Gossypium raimondii
Gorai.006G144600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40290172-40291171 Gossypium raimondii
Gorai.006G144600 1.0kb downstream 1.0kb downstream 5475 true Chr06: 40284697-40290171 Gossypium raimondii
Gorai.006G144600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40284697-40285696 Gossypium raimondii
Gorai.006G144600 2.0kb upstream 2.0kb upstream 6475 true Chr06: 40285697-40292171 Gossypium raimondii
Gorai.006G144600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40290172-40292171 Gossypium raimondii
Gorai.006G144600 2.0kb downstream 2.0kb downstream 6475 true Chr06: 40283697-40290171 Gossypium raimondii
Gorai.006G144600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40283697-40285696 Gossypium raimondii
Gorai.006G144600 5.0kb upstream 5.0kb upstream 9475 true Chr06: 40285697-40295171 Gossypium raimondii
Gorai.006G144600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40290172-40295171 Gossypium raimondii
Gorai.006G144600 5.0kb downstream 5.0kb downstream 9475 true Chr06: 40280697-40290171 Gossypium raimondii
Gorai.006G144600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40280697-40285696 Gossypium raimondii
Gorai.006G144600 10.0kb upstream 10.0kb upstream 14475 true Chr06: 40285697-40300171 Gossypium raimondii
Gorai.006G144600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40290172-40300171 Gossypium raimondii
Gorai.006G144600 10.0kb downstream 10.0kb downstream 14475 true Chr06: 40275697-40290171 Gossypium raimondii
Gorai.006G144600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40275697-40285696 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832821 5264 Brassicales-Malvales View MSA
124342995 5266 SBM View MSA
124241602 5268 Malvidae View MSA
124061101 5270 Rosid View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain