Gene : Gorai.006G129700 G. raimondii v2.1
Defline:  (1 of 1) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  1297
Name:  ? Gorai.006G129700 Secondary Identifier:  ? PAC:26832089
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G129700 0.5kb upstream 0.5kb upstream 5641 true Chr06: 38340596-38346236 Gossypium raimondii
Gorai.006G129700 0.5kb upstream 0.5kb upstream 500 false Chr06: 38340596-38341095 Gossypium raimondii
Gorai.006G129700 0.5kb downstream 0.5kb downstream 5641 true Chr06: 38341096-38346736 Gossypium raimondii
Gorai.006G129700 0.5kb downstream 0.5kb downstream 500 false Chr06: 38346237-38346736 Gossypium raimondii
Gorai.006G129700 1.0kb upstream 1.0kb upstream 6141 true Chr06: 38340096-38346236 Gossypium raimondii
Gorai.006G129700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38340096-38341095 Gossypium raimondii
Gorai.006G129700 1.0kb downstream 1.0kb downstream 6141 true Chr06: 38341096-38347236 Gossypium raimondii
Gorai.006G129700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38346237-38347236 Gossypium raimondii
Gorai.006G129700 2.0kb upstream 2.0kb upstream 7141 true Chr06: 38339096-38346236 Gossypium raimondii
Gorai.006G129700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38339096-38341095 Gossypium raimondii
Gorai.006G129700 2.0kb downstream 2.0kb downstream 7141 true Chr06: 38341096-38348236 Gossypium raimondii
Gorai.006G129700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38346237-38348236 Gossypium raimondii
Gorai.006G129700 5.0kb upstream 5.0kb upstream 10141 true Chr06: 38336096-38346236 Gossypium raimondii
Gorai.006G129700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38336096-38341095 Gossypium raimondii
Gorai.006G129700 5.0kb downstream 5.0kb downstream 10141 true Chr06: 38341096-38351236 Gossypium raimondii
Gorai.006G129700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38346237-38351236 Gossypium raimondii
Gorai.006G129700 10.0kb upstream 10.0kb upstream 15141 true Chr06: 38331096-38346236 Gossypium raimondii
Gorai.006G129700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38331096-38341095 Gossypium raimondii
Gorai.006G129700 10.0kb downstream 10.0kb downstream 15141 true Chr06: 38341096-38356236 Gossypium raimondii
Gorai.006G129700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38346237-38356236 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839779 5264 Brassicales-Malvales View MSA
124341553 5266 SBM View MSA
124242912 5268 Malvidae View MSA
124070952 5270 Rosid View MSA
123745999 5271 Pentapetalae View MSA
122790564 5272 Eudicot View MSA
122048435 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain