Gene : Gorai.006G050400 G. raimondii v2.1
Defline:  (1 of 1) PTHR11972//PTHR11972:SF79 - NADPH OXIDASE Genomic Order:  504
Name:  ? Gorai.006G050400 Secondary Identifier:  ? PAC:26834345
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5934 Gossypium raimondii pathologic  
Graimondii PWY-6854 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G050400 0.5kb upstream 0.5kb upstream 4039 true Chr06: 17246694-17250732 Gossypium raimondii
Gorai.006G050400 0.5kb upstream 0.5kb upstream 500 false Chr06: 17250233-17250732 Gossypium raimondii
Gorai.006G050400 0.5kb downstream 0.5kb downstream 4039 true Chr06: 17246194-17250232 Gossypium raimondii
Gorai.006G050400 0.5kb downstream 0.5kb downstream 500 false Chr06: 17246194-17246693 Gossypium raimondii
Gorai.006G050400 1.0kb upstream 1.0kb upstream 4539 true Chr06: 17246694-17251232 Gossypium raimondii
Gorai.006G050400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17250233-17251232 Gossypium raimondii
Gorai.006G050400 1.0kb downstream 1.0kb downstream 4539 true Chr06: 17245694-17250232 Gossypium raimondii
Gorai.006G050400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17245694-17246693 Gossypium raimondii
Gorai.006G050400 2.0kb upstream 2.0kb upstream 5539 true Chr06: 17246694-17252232 Gossypium raimondii
Gorai.006G050400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17250233-17252232 Gossypium raimondii
Gorai.006G050400 2.0kb downstream 2.0kb downstream 5539 true Chr06: 17244694-17250232 Gossypium raimondii
Gorai.006G050400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17244694-17246693 Gossypium raimondii
Gorai.006G050400 5.0kb upstream 5.0kb upstream 8539 true Chr06: 17246694-17255232 Gossypium raimondii
Gorai.006G050400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17250233-17255232 Gossypium raimondii
Gorai.006G050400 5.0kb downstream 5.0kb downstream 8539 true Chr06: 17241694-17250232 Gossypium raimondii
Gorai.006G050400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17241694-17246693 Gossypium raimondii
Gorai.006G050400 10.0kb upstream 10.0kb upstream 13539 true Chr06: 17246694-17260232 Gossypium raimondii
Gorai.006G050400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17250233-17260232 Gossypium raimondii
Gorai.006G050400 10.0kb downstream 10.0kb downstream 13539 true Chr06: 17236694-17250232 Gossypium raimondii
Gorai.006G050400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17236694-17246693 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823989 5264 Brassicales-Malvales View MSA
124348861 5266 SBM View MSA
124250584 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain