Gene : Gorai.006G096300 G. raimondii v2.1
Defline:  (1 of 1) PTHR11946:SF82 - ISOLEUCINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  963
Name:  ? Gorai.006G096300 Secondary Identifier:  ? PAC:26832765
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G096300 0.5kb upstream 0.5kb upstream 16247 true Chr06: 33558455-33574701 Gossypium raimondii
Gorai.006G096300 0.5kb upstream 0.5kb upstream 500 false Chr06: 33558455-33558954 Gossypium raimondii
Gorai.006G096300 0.5kb downstream 0.5kb downstream 16247 true Chr06: 33558955-33575201 Gossypium raimondii
Gorai.006G096300 0.5kb downstream 0.5kb downstream 500 false Chr06: 33574702-33575201 Gossypium raimondii
Gorai.006G096300 1.0kb upstream 1.0kb upstream 16747 true Chr06: 33557955-33574701 Gossypium raimondii
Gorai.006G096300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 33557955-33558954 Gossypium raimondii
Gorai.006G096300 1.0kb downstream 1.0kb downstream 16747 true Chr06: 33558955-33575701 Gossypium raimondii
Gorai.006G096300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 33574702-33575701 Gossypium raimondii
Gorai.006G096300 2.0kb upstream 2.0kb upstream 17747 true Chr06: 33556955-33574701 Gossypium raimondii
Gorai.006G096300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 33556955-33558954 Gossypium raimondii
Gorai.006G096300 2.0kb downstream 2.0kb downstream 17747 true Chr06: 33558955-33576701 Gossypium raimondii
Gorai.006G096300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 33574702-33576701 Gossypium raimondii
Gorai.006G096300 5.0kb upstream 5.0kb upstream 20747 true Chr06: 33553955-33574701 Gossypium raimondii
Gorai.006G096300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 33553955-33558954 Gossypium raimondii
Gorai.006G096300 5.0kb downstream 5.0kb downstream 20747 true Chr06: 33558955-33579701 Gossypium raimondii
Gorai.006G096300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 33574702-33579701 Gossypium raimondii
Gorai.006G096300 10.0kb upstream 10.0kb upstream 25747 true Chr06: 33548955-33574701 Gossypium raimondii
Gorai.006G096300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 33548955-33558954 Gossypium raimondii
Gorai.006G096300 10.0kb downstream 10.0kb downstream 25747 true Chr06: 33558955-33584701 Gossypium raimondii
Gorai.006G096300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 33574702-33584701 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829224 5264 Brassicales-Malvales View MSA
124344420 5266 SBM View MSA
124243360 5268 Malvidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain