Gene : Gorai.006G123800 G. raimondii v2.1
Defline:  (1 of 2) PF00415//PF01363//PF08381//PF13713//PF16457//PF16627 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) // Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) // Pleckstrin homology domain (PH_12) // Unstructured region between BRX_N and BRX domain (BRX_assoc) Genomic Order:  1238
Name:  ? Gorai.006G123800 Secondary Identifier:  ? PAC:26831408
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G123800 0.5kb upstream 0.5kb upstream 10476 true Chr06: 37501077-37511552 Gossypium raimondii
Gorai.006G123800 0.5kb upstream 0.5kb upstream 500 false Chr06: 37511053-37511552 Gossypium raimondii
Gorai.006G123800 0.5kb downstream 0.5kb downstream 10476 true Chr06: 37500577-37511052 Gossypium raimondii
Gorai.006G123800 0.5kb downstream 0.5kb downstream 500 false Chr06: 37500577-37501076 Gossypium raimondii
Gorai.006G123800 1.0kb upstream 1.0kb upstream 10976 true Chr06: 37501077-37512052 Gossypium raimondii
Gorai.006G123800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37511053-37512052 Gossypium raimondii
Gorai.006G123800 1.0kb downstream 1.0kb downstream 10976 true Chr06: 37500077-37511052 Gossypium raimondii
Gorai.006G123800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37500077-37501076 Gossypium raimondii
Gorai.006G123800 2.0kb upstream 2.0kb upstream 11976 true Chr06: 37501077-37513052 Gossypium raimondii
Gorai.006G123800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37511053-37513052 Gossypium raimondii
Gorai.006G123800 2.0kb downstream 2.0kb downstream 11976 true Chr06: 37499077-37511052 Gossypium raimondii
Gorai.006G123800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37499077-37501076 Gossypium raimondii
Gorai.006G123800 5.0kb upstream 5.0kb upstream 14976 true Chr06: 37501077-37516052 Gossypium raimondii
Gorai.006G123800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37511053-37516052 Gossypium raimondii
Gorai.006G123800 5.0kb downstream 5.0kb downstream 14976 true Chr06: 37496077-37511052 Gossypium raimondii
Gorai.006G123800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37496077-37501076 Gossypium raimondii
Gorai.006G123800 10.0kb upstream 10.0kb upstream 19976 true Chr06: 37501077-37521052 Gossypium raimondii
Gorai.006G123800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37511053-37521052 Gossypium raimondii
Gorai.006G123800 10.0kb downstream 10.0kb downstream 19976 true Chr06: 37491077-37511052 Gossypium raimondii
Gorai.006G123800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37491077-37501076 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691770 5273 Angiosperm View MSA
123807927 5264 Brassicales-Malvales Singleton cluster - no MSA
124304774 5266 SBM Singleton cluster - no MSA
124155219 5268 Malvidae Singleton cluster - no MSA
123880063 5270 Rosid Singleton cluster - no MSA
123647785 5271 Pentapetalae View MSA
122681734 5272 Eudicot View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain