Gene : Gorai.006G104900 G. raimondii v2.1
Defline:  (1 of 2) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  1049
Name:  ? Gorai.006G104900 Secondary Identifier:  ? PAC:26831039
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii DETOX1-PWY Gossypium raimondii pathologic  
Graimondii DETOX1-PWY-1 Gossypium raimondii pathologic  
Graimondii PWY-6854 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G104900 0.5kb upstream 0.5kb upstream 3547 true Chr06: 34720308-34723854 Gossypium raimondii
Gorai.006G104900 0.5kb upstream 0.5kb upstream 500 false Chr06: 34723355-34723854 Gossypium raimondii
Gorai.006G104900 0.5kb downstream 0.5kb downstream 3547 true Chr06: 34719808-34723354 Gossypium raimondii
Gorai.006G104900 0.5kb downstream 0.5kb downstream 500 false Chr06: 34719808-34720307 Gossypium raimondii
Gorai.006G104900 1.0kb upstream 1.0kb upstream 4047 true Chr06: 34720308-34724354 Gossypium raimondii
Gorai.006G104900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 34723355-34724354 Gossypium raimondii
Gorai.006G104900 1.0kb downstream 1.0kb downstream 4047 true Chr06: 34719308-34723354 Gossypium raimondii
Gorai.006G104900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 34719308-34720307 Gossypium raimondii
Gorai.006G104900 2.0kb upstream 2.0kb upstream 5047 true Chr06: 34720308-34725354 Gossypium raimondii
Gorai.006G104900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 34723355-34725354 Gossypium raimondii
Gorai.006G104900 2.0kb downstream 2.0kb downstream 5047 true Chr06: 34718308-34723354 Gossypium raimondii
Gorai.006G104900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 34718308-34720307 Gossypium raimondii
Gorai.006G104900 5.0kb upstream 5.0kb upstream 8047 true Chr06: 34720308-34728354 Gossypium raimondii
Gorai.006G104900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 34723355-34728354 Gossypium raimondii
Gorai.006G104900 5.0kb downstream 5.0kb downstream 8047 true Chr06: 34715308-34723354 Gossypium raimondii
Gorai.006G104900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 34715308-34720307 Gossypium raimondii
Gorai.006G104900 10.0kb upstream 10.0kb upstream 13047 true Chr06: 34720308-34733354 Gossypium raimondii
Gorai.006G104900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 34723355-34733354 Gossypium raimondii
Gorai.006G104900 10.0kb downstream 10.0kb downstream 13047 true Chr06: 34710308-34723354 Gossypium raimondii
Gorai.006G104900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 34710308-34720307 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837251 5264 Brassicales-Malvales View MSA
124340795 5266 SBM View MSA
124253159 5268 Malvidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain