Gene : Gorai.006G185500 G. raimondii v2.1
Defline:  (1 of 1) PTHR11954:SF25 - LS1-LIKE PROTEIN Genomic Order:  1855
Name:  ? Gorai.006G185500 Secondary Identifier:  ? PAC:26833931
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6498 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G185500 0.5kb upstream 0.5kb upstream 2165 true Chr06: 44261125-44263289 Gossypium raimondii
Gorai.006G185500 0.5kb upstream 0.5kb upstream 500 false Chr06: 44262790-44263289 Gossypium raimondii
Gorai.006G185500 0.5kb downstream 0.5kb downstream 2165 true Chr06: 44260625-44262789 Gossypium raimondii
Gorai.006G185500 0.5kb downstream 0.5kb downstream 500 false Chr06: 44260625-44261124 Gossypium raimondii
Gorai.006G185500 1.0kb upstream 1.0kb upstream 2665 true Chr06: 44261125-44263789 Gossypium raimondii
Gorai.006G185500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44262790-44263789 Gossypium raimondii
Gorai.006G185500 1.0kb downstream 1.0kb downstream 2665 true Chr06: 44260125-44262789 Gossypium raimondii
Gorai.006G185500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44260125-44261124 Gossypium raimondii
Gorai.006G185500 2.0kb upstream 2.0kb upstream 3665 true Chr06: 44261125-44264789 Gossypium raimondii
Gorai.006G185500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44262790-44264789 Gossypium raimondii
Gorai.006G185500 2.0kb downstream 2.0kb downstream 3665 true Chr06: 44259125-44262789 Gossypium raimondii
Gorai.006G185500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44259125-44261124 Gossypium raimondii
Gorai.006G185500 5.0kb upstream 5.0kb upstream 6665 true Chr06: 44261125-44267789 Gossypium raimondii
Gorai.006G185500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44262790-44267789 Gossypium raimondii
Gorai.006G185500 5.0kb downstream 5.0kb downstream 6665 true Chr06: 44256125-44262789 Gossypium raimondii
Gorai.006G185500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44256125-44261124 Gossypium raimondii
Gorai.006G185500 10.0kb upstream 10.0kb upstream 11665 true Chr06: 44261125-44272789 Gossypium raimondii
Gorai.006G185500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44262790-44272789 Gossypium raimondii
Gorai.006G185500 10.0kb downstream 10.0kb downstream 11665 true Chr06: 44251125-44262789 Gossypium raimondii
Gorai.006G185500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44251125-44261124 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026284 5273 Angiosperm View MSA
123836662 5264 Brassicales-Malvales View MSA
124346688 5266 SBM View MSA
124250805 5268 Malvidae View MSA
124069445 5270 Rosid View MSA
123741534 5271 Pentapetalae View MSA
122794012 5272 Eudicot View MSA
121349175 5274 Embryophyte View MSA
123424544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain