Gene : Gorai.006G179400 G. raimondii v2.1
Defline:  (1 of 4) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE Genomic Order:  1794
Name:  ? Gorai.006G179400 Secondary Identifier:  ? PAC:26832350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G179400 0.5kb upstream 0.5kb upstream 4462 true Chr06: 43682941-43687402 Gossypium raimondii
Gorai.006G179400 0.5kb upstream 0.5kb upstream 500 false Chr06: 43682941-43683440 Gossypium raimondii
Gorai.006G179400 0.5kb downstream 0.5kb downstream 4462 true Chr06: 43683441-43687902 Gossypium raimondii
Gorai.006G179400 0.5kb downstream 0.5kb downstream 500 false Chr06: 43687403-43687902 Gossypium raimondii
Gorai.006G179400 1.0kb upstream 1.0kb upstream 4962 true Chr06: 43682441-43687402 Gossypium raimondii
Gorai.006G179400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43682441-43683440 Gossypium raimondii
Gorai.006G179400 1.0kb downstream 1.0kb downstream 4962 true Chr06: 43683441-43688402 Gossypium raimondii
Gorai.006G179400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43687403-43688402 Gossypium raimondii
Gorai.006G179400 2.0kb upstream 2.0kb upstream 5962 true Chr06: 43681441-43687402 Gossypium raimondii
Gorai.006G179400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43681441-43683440 Gossypium raimondii
Gorai.006G179400 2.0kb downstream 2.0kb downstream 5962 true Chr06: 43683441-43689402 Gossypium raimondii
Gorai.006G179400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43687403-43689402 Gossypium raimondii
Gorai.006G179400 5.0kb upstream 5.0kb upstream 8962 true Chr06: 43678441-43687402 Gossypium raimondii
Gorai.006G179400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43678441-43683440 Gossypium raimondii
Gorai.006G179400 5.0kb downstream 5.0kb downstream 8962 true Chr06: 43683441-43692402 Gossypium raimondii
Gorai.006G179400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43687403-43692402 Gossypium raimondii
Gorai.006G179400 10.0kb upstream 10.0kb upstream 13962 true Chr06: 43673441-43687402 Gossypium raimondii
Gorai.006G179400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43673441-43683440 Gossypium raimondii
Gorai.006G179400 10.0kb downstream 10.0kb downstream 13962 true Chr06: 43683441-43697402 Gossypium raimondii
Gorai.006G179400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43687403-43697402 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838533 5264 Brassicales-Malvales View MSA
124344275 5266 SBM View MSA
124243094 5268 Malvidae View MSA
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain