Gene : Gorai.006G153000 G. raimondii v2.1
Defline:  (1 of 2) PTHR10555:SF122 - SORTING NEXIN 1 Genomic Order:  1530
Name:  ? Gorai.006G153000 Secondary Identifier:  ? PAC:26833629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G153000 0.5kb upstream 0.5kb upstream 5730 true Chr06: 41171027-41176756 Gossypium raimondii
Gorai.006G153000 0.5kb upstream 0.5kb upstream 500 false Chr06: 41171027-41171526 Gossypium raimondii
Gorai.006G153000 0.5kb downstream 0.5kb downstream 5730 true Chr06: 41171527-41177256 Gossypium raimondii
Gorai.006G153000 0.5kb downstream 0.5kb downstream 500 false Chr06: 41176757-41177256 Gossypium raimondii
Gorai.006G153000 1.0kb upstream 1.0kb upstream 6230 true Chr06: 41170527-41176756 Gossypium raimondii
Gorai.006G153000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41170527-41171526 Gossypium raimondii
Gorai.006G153000 1.0kb downstream 1.0kb downstream 6230 true Chr06: 41171527-41177756 Gossypium raimondii
Gorai.006G153000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41176757-41177756 Gossypium raimondii
Gorai.006G153000 2.0kb upstream 2.0kb upstream 7230 true Chr06: 41169527-41176756 Gossypium raimondii
Gorai.006G153000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41169527-41171526 Gossypium raimondii
Gorai.006G153000 2.0kb downstream 2.0kb downstream 7230 true Chr06: 41171527-41178756 Gossypium raimondii
Gorai.006G153000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41176757-41178756 Gossypium raimondii
Gorai.006G153000 5.0kb upstream 5.0kb upstream 10230 true Chr06: 41166527-41176756 Gossypium raimondii
Gorai.006G153000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41166527-41171526 Gossypium raimondii
Gorai.006G153000 5.0kb downstream 5.0kb downstream 10230 true Chr06: 41171527-41181756 Gossypium raimondii
Gorai.006G153000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41176757-41181756 Gossypium raimondii
Gorai.006G153000 10.0kb upstream 10.0kb upstream 15230 true Chr06: 41161527-41176756 Gossypium raimondii
Gorai.006G153000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41161527-41171526 Gossypium raimondii
Gorai.006G153000 10.0kb downstream 10.0kb downstream 15230 true Chr06: 41171527-41186756 Gossypium raimondii
Gorai.006G153000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41176757-41186756 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829702 5264 Brassicales-Malvales View MSA
124339963 5266 SBM View MSA
124238057 5268 Malvidae View MSA
124066249 5270 Rosid View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain