Gene : Gorai.006G266100 G. raimondii v2.1
Defline:  (1 of 55) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  2661
Name:  ? Gorai.006G266100 Secondary Identifier:  ? PAC:26833156
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G266100 0.5kb upstream 0.5kb upstream 3616 true Chr06: 50489461-50493076 Gossypium raimondii
Gorai.006G266100 0.5kb upstream 0.5kb upstream 500 false Chr06: 50489461-50489960 Gossypium raimondii
Gorai.006G266100 0.5kb downstream 0.5kb downstream 3616 true Chr06: 50489961-50493576 Gossypium raimondii
Gorai.006G266100 0.5kb downstream 0.5kb downstream 500 false Chr06: 50493077-50493576 Gossypium raimondii
Gorai.006G266100 1.0kb upstream 1.0kb upstream 4116 true Chr06: 50488961-50493076 Gossypium raimondii
Gorai.006G266100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50488961-50489960 Gossypium raimondii
Gorai.006G266100 1.0kb downstream 1.0kb downstream 4116 true Chr06: 50489961-50494076 Gossypium raimondii
Gorai.006G266100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50493077-50494076 Gossypium raimondii
Gorai.006G266100 2.0kb upstream 2.0kb upstream 5116 true Chr06: 50487961-50493076 Gossypium raimondii
Gorai.006G266100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50487961-50489960 Gossypium raimondii
Gorai.006G266100 2.0kb downstream 2.0kb downstream 5116 true Chr06: 50489961-50495076 Gossypium raimondii
Gorai.006G266100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50493077-50495076 Gossypium raimondii
Gorai.006G266100 5.0kb upstream 5.0kb upstream 8116 true Chr06: 50484961-50493076 Gossypium raimondii
Gorai.006G266100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50484961-50489960 Gossypium raimondii
Gorai.006G266100 5.0kb downstream 5.0kb downstream 8116 true Chr06: 50489961-50498076 Gossypium raimondii
Gorai.006G266100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50493077-50498076 Gossypium raimondii
Gorai.006G266100 10.0kb upstream 10.0kb upstream 13116 true Chr06: 50479961-50493076 Gossypium raimondii
Gorai.006G266100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50479961-50489960 Gossypium raimondii
Gorai.006G266100 10.0kb downstream 10.0kb downstream 13116 true Chr06: 50489961-50503076 Gossypium raimondii
Gorai.006G266100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50493077-50503076 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835792 5264 Brassicales-Malvales View MSA
124337988 5266 SBM View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain