Gene : Gorai.006G200600 G. raimondii v2.1
Defline:  (1 of 2) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2006
Name:  ? Gorai.006G200600 Secondary Identifier:  ? PAC:26831758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G200600 0.5kb upstream 0.5kb upstream 7021 true Chr06: 45764575-45771595 Gossypium raimondii
Gorai.006G200600 0.5kb upstream 0.5kb upstream 500 false Chr06: 45764575-45765074 Gossypium raimondii
Gorai.006G200600 0.5kb downstream 0.5kb downstream 7021 true Chr06: 45765075-45772095 Gossypium raimondii
Gorai.006G200600 0.5kb downstream 0.5kb downstream 500 false Chr06: 45771596-45772095 Gossypium raimondii
Gorai.006G200600 1.0kb upstream 1.0kb upstream 7521 true Chr06: 45764075-45771595 Gossypium raimondii
Gorai.006G200600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45764075-45765074 Gossypium raimondii
Gorai.006G200600 1.0kb downstream 1.0kb downstream 7521 true Chr06: 45765075-45772595 Gossypium raimondii
Gorai.006G200600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45771596-45772595 Gossypium raimondii
Gorai.006G200600 2.0kb upstream 2.0kb upstream 8521 true Chr06: 45763075-45771595 Gossypium raimondii
Gorai.006G200600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45763075-45765074 Gossypium raimondii
Gorai.006G200600 2.0kb downstream 2.0kb downstream 8521 true Chr06: 45765075-45773595 Gossypium raimondii
Gorai.006G200600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45771596-45773595 Gossypium raimondii
Gorai.006G200600 5.0kb upstream 5.0kb upstream 11521 true Chr06: 45760075-45771595 Gossypium raimondii
Gorai.006G200600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45760075-45765074 Gossypium raimondii
Gorai.006G200600 5.0kb downstream 5.0kb downstream 11521 true Chr06: 45765075-45776595 Gossypium raimondii
Gorai.006G200600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45771596-45776595 Gossypium raimondii
Gorai.006G200600 10.0kb upstream 10.0kb upstream 16521 true Chr06: 45755075-45771595 Gossypium raimondii
Gorai.006G200600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45755075-45765074 Gossypium raimondii
Gorai.006G200600 10.0kb downstream 10.0kb downstream 16521 true Chr06: 45765075-45781595 Gossypium raimondii
Gorai.006G200600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45771596-45781595 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807974 5264 Brassicales-Malvales Singleton cluster - no MSA
124304815 5266 SBM Singleton cluster - no MSA
124253542 5268 Malvidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain