Gene : Gorai.006G159600 G. raimondii v2.1
Defline:  (1 of 3) PTHR11062//PTHR11062:SF66 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  1596
Name:  ? Gorai.006G159600 Secondary Identifier:  ? PAC:26833289
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5980 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G159600 0.5kb upstream 0.5kb upstream 4798 true Chr06: 41872371-41877168 Gossypium raimondii
Gorai.006G159600 0.5kb upstream 0.5kb upstream 500 false Chr06: 41876669-41877168 Gossypium raimondii
Gorai.006G159600 0.5kb downstream 0.5kb downstream 4798 true Chr06: 41871871-41876668 Gossypium raimondii
Gorai.006G159600 0.5kb downstream 0.5kb downstream 500 false Chr06: 41871871-41872370 Gossypium raimondii
Gorai.006G159600 1.0kb upstream 1.0kb upstream 5298 true Chr06: 41872371-41877668 Gossypium raimondii
Gorai.006G159600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41876669-41877668 Gossypium raimondii
Gorai.006G159600 1.0kb downstream 1.0kb downstream 5298 true Chr06: 41871371-41876668 Gossypium raimondii
Gorai.006G159600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41871371-41872370 Gossypium raimondii
Gorai.006G159600 2.0kb upstream 2.0kb upstream 6298 true Chr06: 41872371-41878668 Gossypium raimondii
Gorai.006G159600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41876669-41878668 Gossypium raimondii
Gorai.006G159600 2.0kb downstream 2.0kb downstream 6298 true Chr06: 41870371-41876668 Gossypium raimondii
Gorai.006G159600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41870371-41872370 Gossypium raimondii
Gorai.006G159600 5.0kb upstream 5.0kb upstream 9298 true Chr06: 41872371-41881668 Gossypium raimondii
Gorai.006G159600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41876669-41881668 Gossypium raimondii
Gorai.006G159600 5.0kb downstream 5.0kb downstream 9298 true Chr06: 41867371-41876668 Gossypium raimondii
Gorai.006G159600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41867371-41872370 Gossypium raimondii
Gorai.006G159600 10.0kb upstream 10.0kb upstream 14298 true Chr06: 41872371-41886668 Gossypium raimondii
Gorai.006G159600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41876669-41886668 Gossypium raimondii
Gorai.006G159600 10.0kb downstream 10.0kb downstream 14298 true Chr06: 41862371-41876668 Gossypium raimondii
Gorai.006G159600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41862371-41872370 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836554 5264 Brassicales-Malvales View MSA
124350452 5266 SBM View MSA
124244067 5268 Malvidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain