Gene : Gorai.006G166000 G. raimondii v2.1
Defline:  (1 of 7) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  1660
Name:  ? Gorai.006G166000 Secondary Identifier:  ? PAC:26830305
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1121 Gossypium raimondii pathologic  
Graimondii PWY1F-467 Gossypium raimondii pathologic  
Graimondii PWY-7186 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G166000 0.5kb upstream 0.5kb upstream 3700 true Chr06: 42561519-42565218 Gossypium raimondii
Gorai.006G166000 0.5kb upstream 0.5kb upstream 500 false Chr06: 42564719-42565218 Gossypium raimondii
Gorai.006G166000 0.5kb downstream 0.5kb downstream 3700 true Chr06: 42561019-42564718 Gossypium raimondii
Gorai.006G166000 0.5kb downstream 0.5kb downstream 500 false Chr06: 42561019-42561518 Gossypium raimondii
Gorai.006G166000 1.0kb upstream 1.0kb upstream 4200 true Chr06: 42561519-42565718 Gossypium raimondii
Gorai.006G166000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42564719-42565718 Gossypium raimondii
Gorai.006G166000 1.0kb downstream 1.0kb downstream 4200 true Chr06: 42560519-42564718 Gossypium raimondii
Gorai.006G166000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42560519-42561518 Gossypium raimondii
Gorai.006G166000 2.0kb upstream 2.0kb upstream 5200 true Chr06: 42561519-42566718 Gossypium raimondii
Gorai.006G166000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42564719-42566718 Gossypium raimondii
Gorai.006G166000 2.0kb downstream 2.0kb downstream 5200 true Chr06: 42559519-42564718 Gossypium raimondii
Gorai.006G166000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42559519-42561518 Gossypium raimondii
Gorai.006G166000 5.0kb upstream 5.0kb upstream 8200 true Chr06: 42561519-42569718 Gossypium raimondii
Gorai.006G166000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42564719-42569718 Gossypium raimondii
Gorai.006G166000 5.0kb downstream 5.0kb downstream 8200 true Chr06: 42556519-42564718 Gossypium raimondii
Gorai.006G166000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42556519-42561518 Gossypium raimondii
Gorai.006G166000 10.0kb upstream 10.0kb upstream 13200 true Chr06: 42561519-42574718 Gossypium raimondii
Gorai.006G166000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42564719-42574718 Gossypium raimondii
Gorai.006G166000 10.0kb downstream 10.0kb downstream 13200 true Chr06: 42551519-42564718 Gossypium raimondii
Gorai.006G166000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42551519-42561518 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839790 5264 Brassicales-Malvales View MSA
124346801 5266 SBM View MSA
124254509 5268 Malvidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain