Gene : Gorai.006G171500 G. raimondii v2.1
Defline:  (1 of 2) PTHR11709:SF62 - LACCASE-2 Genomic Order:  1715
Name:  ? Gorai.006G171500 Secondary Identifier:  ? PAC:26832404
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5466 Gossypium raimondii pathologic  
Graimondii PWY-6824 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G171500 0.5kb upstream 0.5kb upstream 3204 true Chr06: 43066737-43069940 Gossypium raimondii
Gorai.006G171500 0.5kb upstream 0.5kb upstream 500 false Chr06: 43066737-43067236 Gossypium raimondii
Gorai.006G171500 0.5kb downstream 0.5kb downstream 3204 true Chr06: 43067237-43070440 Gossypium raimondii
Gorai.006G171500 0.5kb downstream 0.5kb downstream 500 false Chr06: 43069941-43070440 Gossypium raimondii
Gorai.006G171500 1.0kb upstream 1.0kb upstream 3704 true Chr06: 43066237-43069940 Gossypium raimondii
Gorai.006G171500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43066237-43067236 Gossypium raimondii
Gorai.006G171500 1.0kb downstream 1.0kb downstream 3704 true Chr06: 43067237-43070940 Gossypium raimondii
Gorai.006G171500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43069941-43070940 Gossypium raimondii
Gorai.006G171500 2.0kb upstream 2.0kb upstream 4704 true Chr06: 43065237-43069940 Gossypium raimondii
Gorai.006G171500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43065237-43067236 Gossypium raimondii
Gorai.006G171500 2.0kb downstream 2.0kb downstream 4704 true Chr06: 43067237-43071940 Gossypium raimondii
Gorai.006G171500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43069941-43071940 Gossypium raimondii
Gorai.006G171500 5.0kb upstream 5.0kb upstream 7704 true Chr06: 43062237-43069940 Gossypium raimondii
Gorai.006G171500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43062237-43067236 Gossypium raimondii
Gorai.006G171500 5.0kb downstream 5.0kb downstream 7704 true Chr06: 43067237-43074940 Gossypium raimondii
Gorai.006G171500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43069941-43074940 Gossypium raimondii
Gorai.006G171500 10.0kb upstream 10.0kb upstream 12704 true Chr06: 43057237-43069940 Gossypium raimondii
Gorai.006G171500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43057237-43067236 Gossypium raimondii
Gorai.006G171500 10.0kb downstream 10.0kb downstream 12704 true Chr06: 43067237-43079940 Gossypium raimondii
Gorai.006G171500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43069941-43079940 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123808056 5264 Brassicales-Malvales Singleton cluster - no MSA
124350966 5266 SBM View MSA
124245612 5268 Malvidae View MSA
124070693 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain