Gene : Gorai.006G250800 G. raimondii v2.1
Defline:  (1 of 5) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  2508
Name:  ? Gorai.006G250800 Secondary Identifier:  ? PAC:26829148
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii BRANCHED-CHAIN-AA-SYN-PWY Gossypium raimondii pathologic  
Graimondii LEUSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G250800 0.5kb upstream 0.5kb upstream 5135 true Chr06: 49458887-49464021 Gossypium raimondii
Gorai.006G250800 0.5kb upstream 0.5kb upstream 500 false Chr06: 49458887-49459386 Gossypium raimondii
Gorai.006G250800 0.5kb downstream 0.5kb downstream 5135 true Chr06: 49459387-49464521 Gossypium raimondii
Gorai.006G250800 0.5kb downstream 0.5kb downstream 500 false Chr06: 49464022-49464521 Gossypium raimondii
Gorai.006G250800 1.0kb upstream 1.0kb upstream 5635 true Chr06: 49458387-49464021 Gossypium raimondii
Gorai.006G250800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49458387-49459386 Gossypium raimondii
Gorai.006G250800 1.0kb downstream 1.0kb downstream 5635 true Chr06: 49459387-49465021 Gossypium raimondii
Gorai.006G250800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49464022-49465021 Gossypium raimondii
Gorai.006G250800 2.0kb upstream 2.0kb upstream 6635 true Chr06: 49457387-49464021 Gossypium raimondii
Gorai.006G250800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49457387-49459386 Gossypium raimondii
Gorai.006G250800 2.0kb downstream 2.0kb downstream 6635 true Chr06: 49459387-49466021 Gossypium raimondii
Gorai.006G250800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49464022-49466021 Gossypium raimondii
Gorai.006G250800 5.0kb upstream 5.0kb upstream 9635 true Chr06: 49454387-49464021 Gossypium raimondii
Gorai.006G250800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49454387-49459386 Gossypium raimondii
Gorai.006G250800 5.0kb downstream 5.0kb downstream 9635 true Chr06: 49459387-49469021 Gossypium raimondii
Gorai.006G250800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49464022-49469021 Gossypium raimondii
Gorai.006G250800 10.0kb upstream 10.0kb upstream 14635 true Chr06: 49449387-49464021 Gossypium raimondii
Gorai.006G250800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49449387-49459386 Gossypium raimondii
Gorai.006G250800 10.0kb downstream 10.0kb downstream 14635 true Chr06: 49459387-49474021 Gossypium raimondii
Gorai.006G250800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49464022-49474021 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838353 5264 Brassicales-Malvales View MSA
124346473 5266 SBM View MSA
124238803 5268 Malvidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain