Gene : Gorai.006G140200 G. raimondii v2.1
Defline:  (1 of 195) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  1402
Name:  ? Gorai.006G140200 Secondary Identifier:  ? PAC:26833783
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G140200 0.5kb upstream 0.5kb upstream 3071 true Chr06: 39694465-39697535 Gossypium raimondii
Gorai.006G140200 0.5kb upstream 0.5kb upstream 500 false Chr06: 39694465-39694964 Gossypium raimondii
Gorai.006G140200 0.5kb downstream 0.5kb downstream 3071 true Chr06: 39694965-39698035 Gossypium raimondii
Gorai.006G140200 0.5kb downstream 0.5kb downstream 500 false Chr06: 39697536-39698035 Gossypium raimondii
Gorai.006G140200 1.0kb upstream 1.0kb upstream 3571 true Chr06: 39693965-39697535 Gossypium raimondii
Gorai.006G140200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39693965-39694964 Gossypium raimondii
Gorai.006G140200 1.0kb downstream 1.0kb downstream 3571 true Chr06: 39694965-39698535 Gossypium raimondii
Gorai.006G140200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39697536-39698535 Gossypium raimondii
Gorai.006G140200 2.0kb upstream 2.0kb upstream 4571 true Chr06: 39692965-39697535 Gossypium raimondii
Gorai.006G140200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39692965-39694964 Gossypium raimondii
Gorai.006G140200 2.0kb downstream 2.0kb downstream 4571 true Chr06: 39694965-39699535 Gossypium raimondii
Gorai.006G140200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39697536-39699535 Gossypium raimondii
Gorai.006G140200 5.0kb upstream 5.0kb upstream 7571 true Chr06: 39689965-39697535 Gossypium raimondii
Gorai.006G140200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39689965-39694964 Gossypium raimondii
Gorai.006G140200 5.0kb downstream 5.0kb downstream 7571 true Chr06: 39694965-39702535 Gossypium raimondii
Gorai.006G140200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39697536-39702535 Gossypium raimondii
Gorai.006G140200 10.0kb upstream 10.0kb upstream 12571 true Chr06: 39684965-39697535 Gossypium raimondii
Gorai.006G140200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39684965-39694964 Gossypium raimondii
Gorai.006G140200 10.0kb downstream 10.0kb downstream 12571 true Chr06: 39694965-39707535 Gossypium raimondii
Gorai.006G140200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39697536-39707535 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123808243 5264 Brassicales-Malvales Singleton cluster - no MSA
124305067 5266 SBM Singleton cluster - no MSA
124155461 5268 Malvidae Singleton cluster - no MSA
124073794 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain