Gene : Gorai.006G201800 G. raimondii v2.1
Defline:  (1 of 1) PF09341 - Transcription factor Pcc1 (Pcc1) Genomic Order:  2018
Name:  ? Gorai.006G201800 Secondary Identifier:  ? PAC:26829040
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G201800 0.5kb upstream 0.5kb upstream 2170 true Chr06: 45842113-45844282 Gossypium raimondii
Gorai.006G201800 0.5kb upstream 0.5kb upstream 500 false Chr06: 45843783-45844282 Gossypium raimondii
Gorai.006G201800 0.5kb downstream 0.5kb downstream 2170 true Chr06: 45841613-45843782 Gossypium raimondii
Gorai.006G201800 0.5kb downstream 0.5kb downstream 500 false Chr06: 45841613-45842112 Gossypium raimondii
Gorai.006G201800 1.0kb upstream 1.0kb upstream 2670 true Chr06: 45842113-45844782 Gossypium raimondii
Gorai.006G201800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45843783-45844782 Gossypium raimondii
Gorai.006G201800 1.0kb downstream 1.0kb downstream 2670 true Chr06: 45841113-45843782 Gossypium raimondii
Gorai.006G201800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45841113-45842112 Gossypium raimondii
Gorai.006G201800 2.0kb upstream 2.0kb upstream 3670 true Chr06: 45842113-45845782 Gossypium raimondii
Gorai.006G201800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45843783-45845782 Gossypium raimondii
Gorai.006G201800 2.0kb downstream 2.0kb downstream 3670 true Chr06: 45840113-45843782 Gossypium raimondii
Gorai.006G201800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45840113-45842112 Gossypium raimondii
Gorai.006G201800 5.0kb upstream 5.0kb upstream 6670 true Chr06: 45842113-45848782 Gossypium raimondii
Gorai.006G201800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45843783-45848782 Gossypium raimondii
Gorai.006G201800 5.0kb downstream 5.0kb downstream 6670 true Chr06: 45837113-45843782 Gossypium raimondii
Gorai.006G201800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45837113-45842112 Gossypium raimondii
Gorai.006G201800 10.0kb upstream 10.0kb upstream 11670 true Chr06: 45842113-45853782 Gossypium raimondii
Gorai.006G201800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45843783-45853782 Gossypium raimondii
Gorai.006G201800 10.0kb downstream 10.0kb downstream 11670 true Chr06: 45832113-45843782 Gossypium raimondii
Gorai.006G201800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45832113-45842112 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833729 5264 Brassicales-Malvales View MSA
124346529 5266 SBM View MSA
124244344 5268 Malvidae View MSA
124050256 5270 Rosid View MSA
123736925 5271 Pentapetalae View MSA
122787092 5272 Eudicot View MSA
122043690 5273 Angiosperm View MSA
121347192 5274 Embryophyte View MSA
123380508 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain