Gene : Gorai.006G186600 G. raimondii v2.1
Defline:  (1 of 2) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  1866
Name:  ? Gorai.006G186600 Secondary Identifier:  ? PAC:26834211
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G186600 0.5kb upstream 0.5kb upstream 2129 true Chr06: 44363049-44365177 Gossypium raimondii
Gorai.006G186600 0.5kb upstream 0.5kb upstream 500 false Chr06: 44364678-44365177 Gossypium raimondii
Gorai.006G186600 0.5kb downstream 0.5kb downstream 2129 true Chr06: 44362549-44364677 Gossypium raimondii
Gorai.006G186600 0.5kb downstream 0.5kb downstream 500 false Chr06: 44362549-44363048 Gossypium raimondii
Gorai.006G186600 1.0kb upstream 1.0kb upstream 2629 true Chr06: 44363049-44365677 Gossypium raimondii
Gorai.006G186600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44364678-44365677 Gossypium raimondii
Gorai.006G186600 1.0kb downstream 1.0kb downstream 2629 true Chr06: 44362049-44364677 Gossypium raimondii
Gorai.006G186600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44362049-44363048 Gossypium raimondii
Gorai.006G186600 2.0kb upstream 2.0kb upstream 3629 true Chr06: 44363049-44366677 Gossypium raimondii
Gorai.006G186600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44364678-44366677 Gossypium raimondii
Gorai.006G186600 2.0kb downstream 2.0kb downstream 3629 true Chr06: 44361049-44364677 Gossypium raimondii
Gorai.006G186600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44361049-44363048 Gossypium raimondii
Gorai.006G186600 5.0kb upstream 5.0kb upstream 6629 true Chr06: 44363049-44369677 Gossypium raimondii
Gorai.006G186600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44364678-44369677 Gossypium raimondii
Gorai.006G186600 5.0kb downstream 5.0kb downstream 6629 true Chr06: 44358049-44364677 Gossypium raimondii
Gorai.006G186600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44358049-44363048 Gossypium raimondii
Gorai.006G186600 10.0kb upstream 10.0kb upstream 11629 true Chr06: 44363049-44374677 Gossypium raimondii
Gorai.006G186600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44364678-44374677 Gossypium raimondii
Gorai.006G186600 10.0kb downstream 10.0kb downstream 11629 true Chr06: 44353049-44364677 Gossypium raimondii
Gorai.006G186600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44353049-44363048 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837359 5264 Brassicales-Malvales View MSA
124322295 5266 SBM View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain