Gene : Gorai.006G181400 G. raimondii v2.1
Defline:  (1 of 6) PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Genomic Order:  1814
Name:  ? Gorai.006G181400 Secondary Identifier:  ? PAC:26829924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G181400 0.5kb upstream 0.5kb upstream 4564 true Chr06: 43902273-43906836 Gossypium raimondii
Gorai.006G181400 0.5kb upstream 0.5kb upstream 500 false Chr06: 43902273-43902772 Gossypium raimondii
Gorai.006G181400 0.5kb downstream 0.5kb downstream 4564 true Chr06: 43902773-43907336 Gossypium raimondii
Gorai.006G181400 0.5kb downstream 0.5kb downstream 500 false Chr06: 43906837-43907336 Gossypium raimondii
Gorai.006G181400 1.0kb upstream 1.0kb upstream 5064 true Chr06: 43901773-43906836 Gossypium raimondii
Gorai.006G181400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43901773-43902772 Gossypium raimondii
Gorai.006G181400 1.0kb downstream 1.0kb downstream 5064 true Chr06: 43902773-43907836 Gossypium raimondii
Gorai.006G181400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43906837-43907836 Gossypium raimondii
Gorai.006G181400 2.0kb upstream 2.0kb upstream 6064 true Chr06: 43900773-43906836 Gossypium raimondii
Gorai.006G181400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43900773-43902772 Gossypium raimondii
Gorai.006G181400 2.0kb downstream 2.0kb downstream 6064 true Chr06: 43902773-43908836 Gossypium raimondii
Gorai.006G181400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43906837-43908836 Gossypium raimondii
Gorai.006G181400 5.0kb upstream 5.0kb upstream 9064 true Chr06: 43897773-43906836 Gossypium raimondii
Gorai.006G181400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43897773-43902772 Gossypium raimondii
Gorai.006G181400 5.0kb downstream 5.0kb downstream 9064 true Chr06: 43902773-43911836 Gossypium raimondii
Gorai.006G181400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43906837-43911836 Gossypium raimondii
Gorai.006G181400 10.0kb upstream 10.0kb upstream 14064 true Chr06: 43892773-43906836 Gossypium raimondii
Gorai.006G181400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43892773-43902772 Gossypium raimondii
Gorai.006G181400 10.0kb downstream 10.0kb downstream 14064 true Chr06: 43902773-43916836 Gossypium raimondii
Gorai.006G181400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43906837-43916836 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807735 5264 Brassicales-Malvales Singleton cluster - no MSA
124304591 5266 SBM Singleton cluster - no MSA
124155068 5268 Malvidae Singleton cluster - no MSA
124074044 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain