Gene : Gorai.006G132500 G. raimondii v2.1
Defline:  (1 of 1) PTHR13069:SF11 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 Genomic Order:  1325
Name:  ? Gorai.006G132500 Secondary Identifier:  ? PAC:26829336
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6829 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G132500 0.5kb upstream 0.5kb upstream 3530 true Chr06: 38691717-38695246 Gossypium raimondii
Gorai.006G132500 0.5kb upstream 0.5kb upstream 500 false Chr06: 38694747-38695246 Gossypium raimondii
Gorai.006G132500 0.5kb downstream 0.5kb downstream 3530 true Chr06: 38691217-38694746 Gossypium raimondii
Gorai.006G132500 0.5kb downstream 0.5kb downstream 500 false Chr06: 38691217-38691716 Gossypium raimondii
Gorai.006G132500 1.0kb upstream 1.0kb upstream 4030 true Chr06: 38691717-38695746 Gossypium raimondii
Gorai.006G132500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38694747-38695746 Gossypium raimondii
Gorai.006G132500 1.0kb downstream 1.0kb downstream 4030 true Chr06: 38690717-38694746 Gossypium raimondii
Gorai.006G132500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38690717-38691716 Gossypium raimondii
Gorai.006G132500 2.0kb upstream 2.0kb upstream 5030 true Chr06: 38691717-38696746 Gossypium raimondii
Gorai.006G132500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38694747-38696746 Gossypium raimondii
Gorai.006G132500 2.0kb downstream 2.0kb downstream 5030 true Chr06: 38689717-38694746 Gossypium raimondii
Gorai.006G132500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38689717-38691716 Gossypium raimondii
Gorai.006G132500 5.0kb upstream 5.0kb upstream 8030 true Chr06: 38691717-38699746 Gossypium raimondii
Gorai.006G132500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38694747-38699746 Gossypium raimondii
Gorai.006G132500 5.0kb downstream 5.0kb downstream 8030 true Chr06: 38686717-38694746 Gossypium raimondii
Gorai.006G132500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38686717-38691716 Gossypium raimondii
Gorai.006G132500 10.0kb upstream 10.0kb upstream 13030 true Chr06: 38691717-38704746 Gossypium raimondii
Gorai.006G132500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38694747-38704746 Gossypium raimondii
Gorai.006G132500 10.0kb downstream 10.0kb downstream 13030 true Chr06: 38681717-38694746 Gossypium raimondii
Gorai.006G132500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38681717-38691716 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835550 5264 Brassicales-Malvales View MSA
124341724 5266 SBM View MSA
124239519 5268 Malvidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain