Gene : Gorai.006G239100 G. raimondii v2.1
Defline:  (1 of 1) PTHR23133 - IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 Genomic Order:  2391
Name:  ? Gorai.006G239100 Secondary Identifier:  ? PAC:26832590
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii HISTSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G239100 0.5kb upstream 0.5kb upstream 3023 true Chr06: 48621576-48624598 Gossypium raimondii
Gorai.006G239100 0.5kb upstream 0.5kb upstream 500 false Chr06: 48621576-48622075 Gossypium raimondii
Gorai.006G239100 0.5kb downstream 0.5kb downstream 3023 true Chr06: 48622076-48625098 Gossypium raimondii
Gorai.006G239100 0.5kb downstream 0.5kb downstream 500 false Chr06: 48624599-48625098 Gossypium raimondii
Gorai.006G239100 1.0kb upstream 1.0kb upstream 3523 true Chr06: 48621076-48624598 Gossypium raimondii
Gorai.006G239100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48621076-48622075 Gossypium raimondii
Gorai.006G239100 1.0kb downstream 1.0kb downstream 3523 true Chr06: 48622076-48625598 Gossypium raimondii
Gorai.006G239100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48624599-48625598 Gossypium raimondii
Gorai.006G239100 2.0kb upstream 2.0kb upstream 4523 true Chr06: 48620076-48624598 Gossypium raimondii
Gorai.006G239100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48620076-48622075 Gossypium raimondii
Gorai.006G239100 2.0kb downstream 2.0kb downstream 4523 true Chr06: 48622076-48626598 Gossypium raimondii
Gorai.006G239100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48624599-48626598 Gossypium raimondii
Gorai.006G239100 5.0kb upstream 5.0kb upstream 7523 true Chr06: 48617076-48624598 Gossypium raimondii
Gorai.006G239100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48617076-48622075 Gossypium raimondii
Gorai.006G239100 5.0kb downstream 5.0kb downstream 7523 true Chr06: 48622076-48629598 Gossypium raimondii
Gorai.006G239100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48624599-48629598 Gossypium raimondii
Gorai.006G239100 10.0kb upstream 10.0kb upstream 12523 true Chr06: 48612076-48624598 Gossypium raimondii
Gorai.006G239100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48612076-48622075 Gossypium raimondii
Gorai.006G239100 10.0kb downstream 10.0kb downstream 12523 true Chr06: 48622076-48634598 Gossypium raimondii
Gorai.006G239100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48624599-48634598 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833237 5264 Brassicales-Malvales View MSA
124344750 5266 SBM View MSA
124241761 5268 Malvidae View MSA
124067658 5270 Rosid View MSA
123737408 5271 Pentapetalae View MSA
122786767 5272 Eudicot View MSA
122045110 5273 Angiosperm View MSA
121344413 5274 Embryophyte View MSA
123423926 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain