Gene : Gorai.006G239500 G. raimondii v2.1
Defline:  (1 of 3) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE Genomic Order:  2395
Name:  ? Gorai.006G239500 Secondary Identifier:  ? PAC:26830061
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CYSTSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-6936 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G239500 0.5kb upstream 0.5kb upstream 3035 true Chr06: 48641115-48644149 Gossypium raimondii
Gorai.006G239500 0.5kb upstream 0.5kb upstream 500 false Chr06: 48641115-48641614 Gossypium raimondii
Gorai.006G239500 0.5kb downstream 0.5kb downstream 3035 true Chr06: 48641615-48644649 Gossypium raimondii
Gorai.006G239500 0.5kb downstream 0.5kb downstream 500 false Chr06: 48644150-48644649 Gossypium raimondii
Gorai.006G239500 1.0kb upstream 1.0kb upstream 3535 true Chr06: 48640615-48644149 Gossypium raimondii
Gorai.006G239500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48640615-48641614 Gossypium raimondii
Gorai.006G239500 1.0kb downstream 1.0kb downstream 3535 true Chr06: 48641615-48645149 Gossypium raimondii
Gorai.006G239500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48644150-48645149 Gossypium raimondii
Gorai.006G239500 2.0kb upstream 2.0kb upstream 4535 true Chr06: 48639615-48644149 Gossypium raimondii
Gorai.006G239500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48639615-48641614 Gossypium raimondii
Gorai.006G239500 2.0kb downstream 2.0kb downstream 4535 true Chr06: 48641615-48646149 Gossypium raimondii
Gorai.006G239500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48644150-48646149 Gossypium raimondii
Gorai.006G239500 5.0kb upstream 5.0kb upstream 7535 true Chr06: 48636615-48644149 Gossypium raimondii
Gorai.006G239500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48636615-48641614 Gossypium raimondii
Gorai.006G239500 5.0kb downstream 5.0kb downstream 7535 true Chr06: 48641615-48649149 Gossypium raimondii
Gorai.006G239500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48644150-48649149 Gossypium raimondii
Gorai.006G239500 10.0kb upstream 10.0kb upstream 12535 true Chr06: 48631615-48644149 Gossypium raimondii
Gorai.006G239500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48631615-48641614 Gossypium raimondii
Gorai.006G239500 10.0kb downstream 10.0kb downstream 12535 true Chr06: 48641615-48654149 Gossypium raimondii
Gorai.006G239500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48644150-48654149 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836685 5264 Brassicales-Malvales View MSA
124342961 5266 SBM View MSA
124246015 5268 Malvidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain