Gene : Gorai.006G206600 G. raimondii v2.1
Defline:  (1 of 5) PTHR13301:SF51 - CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED Genomic Order:  2066
Name:  ? Gorai.006G206600 Secondary Identifier:  ? PAC:26831078
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1001 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G206600 0.5kb upstream 0.5kb upstream 3727 true Chr06: 46219942-46223668 Gossypium raimondii
Gorai.006G206600 0.5kb upstream 0.5kb upstream 500 false Chr06: 46223169-46223668 Gossypium raimondii
Gorai.006G206600 0.5kb downstream 0.5kb downstream 3727 true Chr06: 46219442-46223168 Gossypium raimondii
Gorai.006G206600 0.5kb downstream 0.5kb downstream 500 false Chr06: 46219442-46219941 Gossypium raimondii
Gorai.006G206600 1.0kb upstream 1.0kb upstream 4227 true Chr06: 46219942-46224168 Gossypium raimondii
Gorai.006G206600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46223169-46224168 Gossypium raimondii
Gorai.006G206600 1.0kb downstream 1.0kb downstream 4227 true Chr06: 46218942-46223168 Gossypium raimondii
Gorai.006G206600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46218942-46219941 Gossypium raimondii
Gorai.006G206600 2.0kb upstream 2.0kb upstream 5227 true Chr06: 46219942-46225168 Gossypium raimondii
Gorai.006G206600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46223169-46225168 Gossypium raimondii
Gorai.006G206600 2.0kb downstream 2.0kb downstream 5227 true Chr06: 46217942-46223168 Gossypium raimondii
Gorai.006G206600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46217942-46219941 Gossypium raimondii
Gorai.006G206600 5.0kb upstream 5.0kb upstream 8227 true Chr06: 46219942-46228168 Gossypium raimondii
Gorai.006G206600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46223169-46228168 Gossypium raimondii
Gorai.006G206600 5.0kb downstream 5.0kb downstream 8227 true Chr06: 46214942-46223168 Gossypium raimondii
Gorai.006G206600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46214942-46219941 Gossypium raimondii
Gorai.006G206600 10.0kb upstream 10.0kb upstream 13227 true Chr06: 46219942-46233168 Gossypium raimondii
Gorai.006G206600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46223169-46233168 Gossypium raimondii
Gorai.006G206600 10.0kb downstream 10.0kb downstream 13227 true Chr06: 46209942-46223168 Gossypium raimondii
Gorai.006G206600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46209942-46219941 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840606 5264 Brassicales-Malvales View MSA
124346924 5266 SBM View MSA
124240954 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain