Gene : Gorai.007G018500 G. raimondii v2.1
Defline:  (1 of 4) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  185
Name:  ? Gorai.007G018500 Secondary Identifier:  ? PAC:26784786
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G018500 0.5kb upstream 0.5kb upstream 7869 true Chr07: 1382755-1390623 Gossypium raimondii
Gorai.007G018500 0.5kb upstream 0.5kb upstream 500 false Chr07: 1390124-1390623 Gossypium raimondii
Gorai.007G018500 0.5kb downstream 0.5kb downstream 7869 true Chr07: 1382255-1390123 Gossypium raimondii
Gorai.007G018500 0.5kb downstream 0.5kb downstream 500 false Chr07: 1382255-1382754 Gossypium raimondii
Gorai.007G018500 1.0kb upstream 1.0kb upstream 8369 true Chr07: 1382755-1391123 Gossypium raimondii
Gorai.007G018500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1390124-1391123 Gossypium raimondii
Gorai.007G018500 1.0kb downstream 1.0kb downstream 8369 true Chr07: 1381755-1390123 Gossypium raimondii
Gorai.007G018500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1381755-1382754 Gossypium raimondii
Gorai.007G018500 2.0kb upstream 2.0kb upstream 9369 true Chr07: 1382755-1392123 Gossypium raimondii
Gorai.007G018500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1390124-1392123 Gossypium raimondii
Gorai.007G018500 2.0kb downstream 2.0kb downstream 9369 true Chr07: 1380755-1390123 Gossypium raimondii
Gorai.007G018500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1380755-1382754 Gossypium raimondii
Gorai.007G018500 5.0kb upstream 5.0kb upstream 12369 true Chr07: 1382755-1395123 Gossypium raimondii
Gorai.007G018500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1390124-1395123 Gossypium raimondii
Gorai.007G018500 5.0kb downstream 5.0kb downstream 12369 true Chr07: 1377755-1390123 Gossypium raimondii
Gorai.007G018500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1377755-1382754 Gossypium raimondii
Gorai.007G018500 10.0kb upstream 10.0kb upstream 17369 true Chr07: 1382755-1400123 Gossypium raimondii
Gorai.007G018500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1390124-1400123 Gossypium raimondii
Gorai.007G018500 10.0kb downstream 10.0kb downstream 17369 true Chr07: 1372755-1390123 Gossypium raimondii
Gorai.007G018500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1372755-1382754 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123809339 5264 Brassicales-Malvales Singleton cluster - no MSA
124306107 5266 SBM Singleton cluster - no MSA
124156329 5268 Malvidae Singleton cluster - no MSA
123881013 5270 Rosid Singleton cluster - no MSA
123464093 5271 Pentapetalae Singleton cluster - no MSA
122499422 5272 Eudicot Singleton cluster - no MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain