Gene : Gorai.007G080400 G. raimondii v2.1
Defline:  (1 of 5) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  804
Name:  ? Gorai.007G080400 Secondary Identifier:  ? PAC:26784166
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3461 Gossypium raimondii pathologic  
Graimondii PWY-3462 Gossypium raimondii pathologic  
Graimondii PWY-3481 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G080400 0.5kb upstream 0.5kb upstream 5341 true Chr07: 5748213-5753553 Gossypium raimondii
Gorai.007G080400 0.5kb upstream 0.5kb upstream 500 false Chr07: 5748213-5748712 Gossypium raimondii
Gorai.007G080400 0.5kb downstream 0.5kb downstream 5341 true Chr07: 5748713-5754053 Gossypium raimondii
Gorai.007G080400 0.5kb downstream 0.5kb downstream 500 false Chr07: 5753554-5754053 Gossypium raimondii
Gorai.007G080400 1.0kb upstream 1.0kb upstream 5841 true Chr07: 5747713-5753553 Gossypium raimondii
Gorai.007G080400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5747713-5748712 Gossypium raimondii
Gorai.007G080400 1.0kb downstream 1.0kb downstream 5841 true Chr07: 5748713-5754553 Gossypium raimondii
Gorai.007G080400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5753554-5754553 Gossypium raimondii
Gorai.007G080400 2.0kb upstream 2.0kb upstream 6841 true Chr07: 5746713-5753553 Gossypium raimondii
Gorai.007G080400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5746713-5748712 Gossypium raimondii
Gorai.007G080400 2.0kb downstream 2.0kb downstream 6841 true Chr07: 5748713-5755553 Gossypium raimondii
Gorai.007G080400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5753554-5755553 Gossypium raimondii
Gorai.007G080400 5.0kb upstream 5.0kb upstream 9841 true Chr07: 5743713-5753553 Gossypium raimondii
Gorai.007G080400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5743713-5748712 Gossypium raimondii
Gorai.007G080400 5.0kb downstream 5.0kb downstream 9841 true Chr07: 5748713-5758553 Gossypium raimondii
Gorai.007G080400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5753554-5758553 Gossypium raimondii
Gorai.007G080400 10.0kb upstream 10.0kb upstream 14841 true Chr07: 5738713-5753553 Gossypium raimondii
Gorai.007G080400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5738713-5748712 Gossypium raimondii
Gorai.007G080400 10.0kb downstream 10.0kb downstream 14841 true Chr07: 5748713-5763553 Gossypium raimondii
Gorai.007G080400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5753554-5763553 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
123828372 5264 Brassicales-Malvales View MSA
124336779 5266 SBM View MSA
124252605 5268 Malvidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain