Gene : Gorai.007G054100 G. raimondii v2.1
Defline:  (1 of 2) PTHR21493//PTHR21493:SF142 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN Genomic Order:  541
Name:  ? Gorai.007G054100 Secondary Identifier:  ? PAC:26779427
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii LIPAS-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G054100 0.5kb upstream 0.5kb upstream 4778 true Chr07: 3762234-3767011 Gossypium raimondii
Gorai.007G054100 0.5kb upstream 0.5kb upstream 500 false Chr07: 3766512-3767011 Gossypium raimondii
Gorai.007G054100 0.5kb downstream 0.5kb downstream 4778 true Chr07: 3761734-3766511 Gossypium raimondii
Gorai.007G054100 0.5kb downstream 0.5kb downstream 500 false Chr07: 3761734-3762233 Gossypium raimondii
Gorai.007G054100 1.0kb upstream 1.0kb upstream 5278 true Chr07: 3762234-3767511 Gossypium raimondii
Gorai.007G054100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3766512-3767511 Gossypium raimondii
Gorai.007G054100 1.0kb downstream 1.0kb downstream 5278 true Chr07: 3761234-3766511 Gossypium raimondii
Gorai.007G054100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3761234-3762233 Gossypium raimondii
Gorai.007G054100 2.0kb upstream 2.0kb upstream 6278 true Chr07: 3762234-3768511 Gossypium raimondii
Gorai.007G054100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3766512-3768511 Gossypium raimondii
Gorai.007G054100 2.0kb downstream 2.0kb downstream 6278 true Chr07: 3760234-3766511 Gossypium raimondii
Gorai.007G054100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3760234-3762233 Gossypium raimondii
Gorai.007G054100 5.0kb upstream 5.0kb upstream 9278 true Chr07: 3762234-3771511 Gossypium raimondii
Gorai.007G054100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3766512-3771511 Gossypium raimondii
Gorai.007G054100 5.0kb downstream 5.0kb downstream 9278 true Chr07: 3757234-3766511 Gossypium raimondii
Gorai.007G054100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3757234-3762233 Gossypium raimondii
Gorai.007G054100 10.0kb upstream 10.0kb upstream 14278 true Chr07: 3762234-3776511 Gossypium raimondii
Gorai.007G054100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3766512-3776511 Gossypium raimondii
Gorai.007G054100 10.0kb downstream 10.0kb downstream 14278 true Chr07: 3752234-3766511 Gossypium raimondii
Gorai.007G054100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3752234-3762233 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832860 5264 Brassicales-Malvales View MSA
124346709 5266 SBM View MSA
124245558 5268 Malvidae View MSA
124069453 5270 Rosid View MSA
123746073 5271 Pentapetalae View MSA
122791572 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain