Gene : Gorai.007G008800 G. raimondii v2.1
Defline:  (1 of 2) PTHR33391:SF5 - PHOTOSYSTEM II REACTION CENTER PROTEIN L Genomic Order:  88
Name:  ? Gorai.007G008800 Secondary Identifier:  ? PAC:26780663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G008800 0.5kb upstream 0.5kb upstream 914 true Chr07: 685639-686552 Gossypium raimondii
Gorai.007G008800 0.5kb upstream 0.5kb upstream 500 false Chr07: 686053-686552 Gossypium raimondii
Gorai.007G008800 0.5kb downstream 0.5kb downstream 914 true Chr07: 685139-686052 Gossypium raimondii
Gorai.007G008800 0.5kb downstream 0.5kb downstream 500 false Chr07: 685139-685638 Gossypium raimondii
Gorai.007G008800 1.0kb upstream 1.0kb upstream 1414 true Chr07: 685639-687052 Gossypium raimondii
Gorai.007G008800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 686053-687052 Gossypium raimondii
Gorai.007G008800 1.0kb downstream 1.0kb downstream 1414 true Chr07: 684639-686052 Gossypium raimondii
Gorai.007G008800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 684639-685638 Gossypium raimondii
Gorai.007G008800 2.0kb upstream 2.0kb upstream 2414 true Chr07: 685639-688052 Gossypium raimondii
Gorai.007G008800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 686053-688052 Gossypium raimondii
Gorai.007G008800 2.0kb downstream 2.0kb downstream 2414 true Chr07: 683639-686052 Gossypium raimondii
Gorai.007G008800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 683639-685638 Gossypium raimondii
Gorai.007G008800 5.0kb upstream 5.0kb upstream 5414 true Chr07: 685639-691052 Gossypium raimondii
Gorai.007G008800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 686053-691052 Gossypium raimondii
Gorai.007G008800 5.0kb downstream 5.0kb downstream 5414 true Chr07: 680639-686052 Gossypium raimondii
Gorai.007G008800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 680639-685638 Gossypium raimondii
Gorai.007G008800 10.0kb upstream 10.0kb upstream 10414 true Chr07: 685639-696052 Gossypium raimondii
Gorai.007G008800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 686053-696052 Gossypium raimondii
Gorai.007G008800 10.0kb downstream 10.0kb downstream 10414 true Chr07: 675639-686052 Gossypium raimondii
Gorai.007G008800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 675639-685638 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027002 5273 Angiosperm View MSA
123808762 5264 Brassicales-Malvales Singleton cluster - no MSA
124305559 5266 SBM Singleton cluster - no MSA
124254468 5268 Malvidae View MSA
123952932 5270 Rosid View MSA
123530518 5271 Pentapetalae View MSA
122797055 5272 Eudicot View MSA
121296728 5274 Embryophyte View MSA
123424436 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain