Gene : Gorai.007G172100 G. raimondii v2.1
Defline:  (1 of 3) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  1721
Name:  ? Gorai.007G172100 Secondary Identifier:  ? PAC:26785015
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CHLOROPHYLL-SYN Gossypium raimondii pathologic  
Graimondii HEME-BIOSYNTHESIS-II Gossypium raimondii pathologic  
Graimondii PWY-5918 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G172100 0.5kb upstream 0.5kb upstream 5174 true Chr07: 15799916-15805089 Gossypium raimondii
Gorai.007G172100 0.5kb upstream 0.5kb upstream 500 false Chr07: 15799916-15800415 Gossypium raimondii
Gorai.007G172100 0.5kb downstream 0.5kb downstream 5174 true Chr07: 15800416-15805589 Gossypium raimondii
Gorai.007G172100 0.5kb downstream 0.5kb downstream 500 false Chr07: 15805090-15805589 Gossypium raimondii
Gorai.007G172100 1.0kb upstream 1.0kb upstream 5674 true Chr07: 15799416-15805089 Gossypium raimondii
Gorai.007G172100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15799416-15800415 Gossypium raimondii
Gorai.007G172100 1.0kb downstream 1.0kb downstream 5674 true Chr07: 15800416-15806089 Gossypium raimondii
Gorai.007G172100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15805090-15806089 Gossypium raimondii
Gorai.007G172100 2.0kb upstream 2.0kb upstream 6674 true Chr07: 15798416-15805089 Gossypium raimondii
Gorai.007G172100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15798416-15800415 Gossypium raimondii
Gorai.007G172100 2.0kb downstream 2.0kb downstream 6674 true Chr07: 15800416-15807089 Gossypium raimondii
Gorai.007G172100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15805090-15807089 Gossypium raimondii
Gorai.007G172100 5.0kb upstream 5.0kb upstream 9674 true Chr07: 15795416-15805089 Gossypium raimondii
Gorai.007G172100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15795416-15800415 Gossypium raimondii
Gorai.007G172100 5.0kb downstream 5.0kb downstream 9674 true Chr07: 15800416-15810089 Gossypium raimondii
Gorai.007G172100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15805090-15810089 Gossypium raimondii
Gorai.007G172100 10.0kb upstream 10.0kb upstream 14674 true Chr07: 15790416-15805089 Gossypium raimondii
Gorai.007G172100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15790416-15800415 Gossypium raimondii
Gorai.007G172100 10.0kb downstream 10.0kb downstream 14674 true Chr07: 15800416-15815089 Gossypium raimondii
Gorai.007G172100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15805090-15815089 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121515474 5273 Angiosperm Singleton cluster - no MSA
123809369 5264 Brassicales-Malvales Singleton cluster - no MSA
124306133 5266 SBM Singleton cluster - no MSA
124156350 5268 Malvidae Singleton cluster - no MSA
123881033 5270 Rosid Singleton cluster - no MSA
123464111 5271 Pentapetalae Singleton cluster - no MSA
122499440 5272 Eudicot Singleton cluster - no MSA
120788389 5274 Embryophyte Singleton cluster - no MSA
122830125 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain