Gene : Gorai.011G000800 G. raimondii v2.1
Defline:  (1 of 4) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  8
Name:  ? Gorai.011G000800 Secondary Identifier:  ? PAC:26812330
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii BRANCHED-CHAIN-AA-SYN-PWY Gossypium raimondii pathologic  
Graimondii ILEUSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-3001 Gossypium raimondii pathologic  
Graimondii VALSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G000800 0.5kb upstream 0.5kb upstream 9860 true Chr11: 61233-71092 Gossypium raimondii
Gorai.011G000800 0.5kb upstream 0.5kb upstream 500 false Chr11: 70593-71092 Gossypium raimondii
Gorai.011G000800 0.5kb downstream 0.5kb downstream 9860 true Chr11: 60733-70592 Gossypium raimondii
Gorai.011G000800 0.5kb downstream 0.5kb downstream 500 false Chr11: 60733-61232 Gossypium raimondii
Gorai.011G000800 1.0kb upstream 1.0kb upstream 10360 true Chr11: 61233-71592 Gossypium raimondii
Gorai.011G000800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 70593-71592 Gossypium raimondii
Gorai.011G000800 1.0kb downstream 1.0kb downstream 10360 true Chr11: 60233-70592 Gossypium raimondii
Gorai.011G000800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 60233-61232 Gossypium raimondii
Gorai.011G000800 2.0kb upstream 2.0kb upstream 11360 true Chr11: 61233-72592 Gossypium raimondii
Gorai.011G000800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 70593-72592 Gossypium raimondii
Gorai.011G000800 2.0kb downstream 2.0kb downstream 11360 true Chr11: 59233-70592 Gossypium raimondii
Gorai.011G000800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 59233-61232 Gossypium raimondii
Gorai.011G000800 5.0kb upstream 5.0kb upstream 14360 true Chr11: 61233-75592 Gossypium raimondii
Gorai.011G000800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 70593-75592 Gossypium raimondii
Gorai.011G000800 5.0kb downstream 5.0kb downstream 14360 true Chr11: 56233-70592 Gossypium raimondii
Gorai.011G000800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 56233-61232 Gossypium raimondii
Gorai.011G000800 10.0kb upstream 10.0kb upstream 19360 true Chr11: 61233-80592 Gossypium raimondii
Gorai.011G000800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 70593-80592 Gossypium raimondii
Gorai.011G000800 10.0kb downstream 10.0kb downstream 19360 true Chr11: 51233-70592 Gossypium raimondii
Gorai.011G000800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 51233-61232 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828492 5264 Brassicales-Malvales View MSA
124339638 5266 SBM View MSA
124249053 5268 Malvidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain