Gene : Gorai.011G041700 G. raimondii v2.1

Defline:  (1 of 4) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  417
Name:  ? Gorai.011G041700 Secondary Identifier:  ? PAC:26811579

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLYCOGENSYNTH-PWY Gossypium raimondii pathologic  
Graimondii PWY-622 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G041700 0.5kb upstream 0.5kb upstream 12714 true Chr11: 3090522-3103235 Gossypium raimondii
Gorai.011G041700 0.5kb upstream 0.5kb upstream 500 false Chr11: 3102736-3103235 Gossypium raimondii
Gorai.011G041700 0.5kb downstream 0.5kb downstream 12714 true Chr11: 3090022-3102735 Gossypium raimondii
Gorai.011G041700 0.5kb downstream 0.5kb downstream 500 false Chr11: 3090022-3090521 Gossypium raimondii
Gorai.011G041700 1.0kb upstream 1.0kb upstream 13214 true Chr11: 3090522-3103735 Gossypium raimondii
Gorai.011G041700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3102736-3103735 Gossypium raimondii
Gorai.011G041700 1.0kb downstream 1.0kb downstream 13214 true Chr11: 3089522-3102735 Gossypium raimondii
Gorai.011G041700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3089522-3090521 Gossypium raimondii
Gorai.011G041700 2.0kb upstream 2.0kb upstream 14214 true Chr11: 3090522-3104735 Gossypium raimondii
Gorai.011G041700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3102736-3104735 Gossypium raimondii
Gorai.011G041700 2.0kb downstream 2.0kb downstream 14214 true Chr11: 3088522-3102735 Gossypium raimondii
Gorai.011G041700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3088522-3090521 Gossypium raimondii
Gorai.011G041700 5.0kb upstream 5.0kb upstream 17214 true Chr11: 3090522-3107735 Gossypium raimondii
Gorai.011G041700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3102736-3107735 Gossypium raimondii
Gorai.011G041700 5.0kb downstream 5.0kb downstream 17214 true Chr11: 3085522-3102735 Gossypium raimondii
Gorai.011G041700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3085522-3090521 Gossypium raimondii
Gorai.011G041700 10.0kb upstream 10.0kb upstream 22214 true Chr11: 3090522-3112735 Gossypium raimondii
Gorai.011G041700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3102736-3112735 Gossypium raimondii
Gorai.011G041700 10.0kb downstream 10.0kb downstream 22214 true Chr11: 3080522-3102735 Gossypium raimondii
Gorai.011G041700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3080522-3090521 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829886 5264 Brassicales-Malvales View MSA
124343403 5266 SBM View MSA
124243663 5268 Malvidae View MSA
124062542 5270 Rosid View MSA
123737586 5271 Pentapetalae View MSA
122786746 5272 Eudicot View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain