Gene : Gorai.011G022500 G. raimondii v2.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF42 - SPHINGOSINE KINASE Genomic Order:  225
Name:  ? Gorai.011G022500 Secondary Identifier:  ? PAC:26809394
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5129 Gossypium raimondii pathologic  
Graimondii PWY-6483 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G022500 0.5kb upstream 0.5kb upstream 4374 true Chr11: 1579217-1583590 Gossypium raimondii
Gorai.011G022500 0.5kb upstream 0.5kb upstream 500 false Chr11: 1583091-1583590 Gossypium raimondii
Gorai.011G022500 0.5kb downstream 0.5kb downstream 4374 true Chr11: 1578717-1583090 Gossypium raimondii
Gorai.011G022500 0.5kb downstream 0.5kb downstream 500 false Chr11: 1578717-1579216 Gossypium raimondii
Gorai.011G022500 1.0kb upstream 1.0kb upstream 4874 true Chr11: 1579217-1584090 Gossypium raimondii
Gorai.011G022500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1583091-1584090 Gossypium raimondii
Gorai.011G022500 1.0kb downstream 1.0kb downstream 4874 true Chr11: 1578217-1583090 Gossypium raimondii
Gorai.011G022500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1578217-1579216 Gossypium raimondii
Gorai.011G022500 2.0kb upstream 2.0kb upstream 5874 true Chr11: 1579217-1585090 Gossypium raimondii
Gorai.011G022500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1583091-1585090 Gossypium raimondii
Gorai.011G022500 2.0kb downstream 2.0kb downstream 5874 true Chr11: 1577217-1583090 Gossypium raimondii
Gorai.011G022500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1577217-1579216 Gossypium raimondii
Gorai.011G022500 5.0kb upstream 5.0kb upstream 8874 true Chr11: 1579217-1588090 Gossypium raimondii
Gorai.011G022500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1583091-1588090 Gossypium raimondii
Gorai.011G022500 5.0kb downstream 5.0kb downstream 8874 true Chr11: 1574217-1583090 Gossypium raimondii
Gorai.011G022500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1574217-1579216 Gossypium raimondii
Gorai.011G022500 10.0kb upstream 10.0kb upstream 13874 true Chr11: 1579217-1593090 Gossypium raimondii
Gorai.011G022500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1583091-1593090 Gossypium raimondii
Gorai.011G022500 10.0kb downstream 10.0kb downstream 13874 true Chr11: 1569217-1583090 Gossypium raimondii
Gorai.011G022500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1569217-1579216 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827390 5264 Brassicales-Malvales View MSA
124339583 5266 SBM View MSA
124247883 5268 Malvidae View MSA
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain