Gene : Gorai.011G186700 G. raimondii v2.1
Defline:  (1 of 2) PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1867
Name:  ? Gorai.011G186700 Secondary Identifier:  ? PAC:26810786
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G186700 0.5kb upstream 0.5kb upstream 3372 true Chr11: 44436144-44439515 Gossypium raimondii
Gorai.011G186700 0.5kb upstream 0.5kb upstream 500 false Chr11: 44439016-44439515 Gossypium raimondii
Gorai.011G186700 0.5kb downstream 0.5kb downstream 3372 true Chr11: 44435644-44439015 Gossypium raimondii
Gorai.011G186700 0.5kb downstream 0.5kb downstream 500 false Chr11: 44435644-44436143 Gossypium raimondii
Gorai.011G186700 1.0kb upstream 1.0kb upstream 3872 true Chr11: 44436144-44440015 Gossypium raimondii
Gorai.011G186700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 44439016-44440015 Gossypium raimondii
Gorai.011G186700 1.0kb downstream 1.0kb downstream 3872 true Chr11: 44435144-44439015 Gossypium raimondii
Gorai.011G186700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 44435144-44436143 Gossypium raimondii
Gorai.011G186700 2.0kb upstream 2.0kb upstream 4872 true Chr11: 44436144-44441015 Gossypium raimondii
Gorai.011G186700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 44439016-44441015 Gossypium raimondii
Gorai.011G186700 2.0kb downstream 2.0kb downstream 4872 true Chr11: 44434144-44439015 Gossypium raimondii
Gorai.011G186700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 44434144-44436143 Gossypium raimondii
Gorai.011G186700 5.0kb upstream 5.0kb upstream 7872 true Chr11: 44436144-44444015 Gossypium raimondii
Gorai.011G186700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 44439016-44444015 Gossypium raimondii
Gorai.011G186700 5.0kb downstream 5.0kb downstream 7872 true Chr11: 44431144-44439015 Gossypium raimondii
Gorai.011G186700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 44431144-44436143 Gossypium raimondii
Gorai.011G186700 10.0kb upstream 10.0kb upstream 12872 true Chr11: 44436144-44449015 Gossypium raimondii
Gorai.011G186700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 44439016-44449015 Gossypium raimondii
Gorai.011G186700 10.0kb downstream 10.0kb downstream 12872 true Chr11: 44426144-44439015 Gossypium raimondii
Gorai.011G186700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 44426144-44436143 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828340 5264 Brassicales-Malvales View MSA
124340435 5266 SBM View MSA
124251521 5268 Malvidae View MSA
124067904 5270 Rosid View MSA
123739632 5271 Pentapetalae View MSA
122785839 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain