Gene : Gorai.011G131800 G. raimondii v2.1
Defline:  (1 of 2) PTHR23023:SF121 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED Genomic Order:  1318
Name:  ? Gorai.011G131800 Secondary Identifier:  ? PAC:26809735
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWYDQC-4 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G131800 0.5kb upstream 0.5kb upstream 2204 true Chr11: 19951297-19953500 Gossypium raimondii
Gorai.011G131800 0.5kb upstream 0.5kb upstream 500 false Chr11: 19953001-19953500 Gossypium raimondii
Gorai.011G131800 0.5kb downstream 0.5kb downstream 2204 true Chr11: 19950797-19953000 Gossypium raimondii
Gorai.011G131800 0.5kb downstream 0.5kb downstream 500 false Chr11: 19950797-19951296 Gossypium raimondii
Gorai.011G131800 1.0kb upstream 1.0kb upstream 2704 true Chr11: 19951297-19954000 Gossypium raimondii
Gorai.011G131800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19953001-19954000 Gossypium raimondii
Gorai.011G131800 1.0kb downstream 1.0kb downstream 2704 true Chr11: 19950297-19953000 Gossypium raimondii
Gorai.011G131800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19950297-19951296 Gossypium raimondii
Gorai.011G131800 2.0kb upstream 2.0kb upstream 3704 true Chr11: 19951297-19955000 Gossypium raimondii
Gorai.011G131800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19953001-19955000 Gossypium raimondii
Gorai.011G131800 2.0kb downstream 2.0kb downstream 3704 true Chr11: 19949297-19953000 Gossypium raimondii
Gorai.011G131800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19949297-19951296 Gossypium raimondii
Gorai.011G131800 5.0kb upstream 5.0kb upstream 6704 true Chr11: 19951297-19958000 Gossypium raimondii
Gorai.011G131800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19953001-19958000 Gossypium raimondii
Gorai.011G131800 5.0kb downstream 5.0kb downstream 6704 true Chr11: 19946297-19953000 Gossypium raimondii
Gorai.011G131800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19946297-19951296 Gossypium raimondii
Gorai.011G131800 10.0kb upstream 10.0kb upstream 11704 true Chr11: 19951297-19963000 Gossypium raimondii
Gorai.011G131800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19953001-19963000 Gossypium raimondii
Gorai.011G131800 10.0kb downstream 10.0kb downstream 11704 true Chr11: 19941297-19953000 Gossypium raimondii
Gorai.011G131800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19941297-19951296 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835695 5264 Brassicales-Malvales View MSA
124349496 5266 SBM View MSA
124250017 5268 Malvidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain