Gene : Gorai.011G102700 G. raimondii v2.1
Defline:  (1 of 13) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  1027
Name:  ? Gorai.011G102700 Secondary Identifier:  ? PAC:26811511
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5120 Gossypium raimondii pathologic  
Graimondii PWY-5910 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G102700 0.5kb upstream 0.5kb upstream 2196 true Chr11: 11773489-11775684 Gossypium raimondii
Gorai.011G102700 0.5kb upstream 0.5kb upstream 500 false Chr11: 11773489-11773988 Gossypium raimondii
Gorai.011G102700 0.5kb downstream 0.5kb downstream 2196 true Chr11: 11773989-11776184 Gossypium raimondii
Gorai.011G102700 0.5kb downstream 0.5kb downstream 500 false Chr11: 11775685-11776184 Gossypium raimondii
Gorai.011G102700 1.0kb upstream 1.0kb upstream 2696 true Chr11: 11772989-11775684 Gossypium raimondii
Gorai.011G102700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11772989-11773988 Gossypium raimondii
Gorai.011G102700 1.0kb downstream 1.0kb downstream 2696 true Chr11: 11773989-11776684 Gossypium raimondii
Gorai.011G102700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11775685-11776684 Gossypium raimondii
Gorai.011G102700 2.0kb upstream 2.0kb upstream 3696 true Chr11: 11771989-11775684 Gossypium raimondii
Gorai.011G102700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11771989-11773988 Gossypium raimondii
Gorai.011G102700 2.0kb downstream 2.0kb downstream 3696 true Chr11: 11773989-11777684 Gossypium raimondii
Gorai.011G102700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11775685-11777684 Gossypium raimondii
Gorai.011G102700 5.0kb upstream 5.0kb upstream 6696 true Chr11: 11768989-11775684 Gossypium raimondii
Gorai.011G102700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11768989-11773988 Gossypium raimondii
Gorai.011G102700 5.0kb downstream 5.0kb downstream 6696 true Chr11: 11773989-11780684 Gossypium raimondii
Gorai.011G102700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11775685-11780684 Gossypium raimondii
Gorai.011G102700 10.0kb upstream 10.0kb upstream 11696 true Chr11: 11763989-11775684 Gossypium raimondii
Gorai.011G102700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11763989-11773988 Gossypium raimondii
Gorai.011G102700 10.0kb downstream 10.0kb downstream 11696 true Chr11: 11773989-11785684 Gossypium raimondii
Gorai.011G102700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11775685-11785684 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123812878 5264 Brassicales-Malvales Singleton cluster - no MSA
124309444 5266 SBM Singleton cluster - no MSA
124256738 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain