Gene : Gorai.011G055200 G. raimondii v2.1
Defline:  (1 of 6) 2.6.1.2 - Alanine transaminase / Glutamic--pyruvic transaminase Genomic Order:  552
Name:  ? Gorai.011G055200 Secondary Identifier:  ? PAC:26810154
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ALANINE-DEG3-PWY Gossypium raimondii pathologic  
Graimondii ALANINE-SYN2-PWY Gossypium raimondii pathologic  
Graimondii PWY-7115 Gossypium raimondii pathologic  
Graimondii PWY-7117 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G055200 0.5kb upstream 0.5kb upstream 4552 true Chr11: 4342668-4347219 Gossypium raimondii
Gorai.011G055200 0.5kb upstream 0.5kb upstream 500 false Chr11: 4342668-4343167 Gossypium raimondii
Gorai.011G055200 0.5kb downstream 0.5kb downstream 4552 true Chr11: 4343168-4347719 Gossypium raimondii
Gorai.011G055200 0.5kb downstream 0.5kb downstream 500 false Chr11: 4347220-4347719 Gossypium raimondii
Gorai.011G055200 1.0kb upstream 1.0kb upstream 5052 true Chr11: 4342168-4347219 Gossypium raimondii
Gorai.011G055200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4342168-4343167 Gossypium raimondii
Gorai.011G055200 1.0kb downstream 1.0kb downstream 5052 true Chr11: 4343168-4348219 Gossypium raimondii
Gorai.011G055200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4347220-4348219 Gossypium raimondii
Gorai.011G055200 2.0kb upstream 2.0kb upstream 6052 true Chr11: 4341168-4347219 Gossypium raimondii
Gorai.011G055200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4341168-4343167 Gossypium raimondii
Gorai.011G055200 2.0kb downstream 2.0kb downstream 6052 true Chr11: 4343168-4349219 Gossypium raimondii
Gorai.011G055200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4347220-4349219 Gossypium raimondii
Gorai.011G055200 5.0kb upstream 5.0kb upstream 9052 true Chr11: 4338168-4347219 Gossypium raimondii
Gorai.011G055200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4338168-4343167 Gossypium raimondii
Gorai.011G055200 5.0kb downstream 5.0kb downstream 9052 true Chr11: 4343168-4352219 Gossypium raimondii
Gorai.011G055200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4347220-4352219 Gossypium raimondii
Gorai.011G055200 10.0kb upstream 10.0kb upstream 14052 true Chr11: 4333168-4347219 Gossypium raimondii
Gorai.011G055200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4333168-4343167 Gossypium raimondii
Gorai.011G055200 10.0kb downstream 10.0kb downstream 14052 true Chr11: 4343168-4357219 Gossypium raimondii
Gorai.011G055200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4347220-4357219 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842850 5264 Brassicales-Malvales View MSA
124323820 5266 SBM View MSA
124251764 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain