Gene : Gorai.011G099400 G. raimondii v2.1
Defline:  (1 of 5) PTHR10031:SF6 - ATP SYNTHASE SUBUNIT C, CHLOROPLASTIC Genomic Order:  994
Name:  ? Gorai.011G099400 Secondary Identifier:  ? PAC:26809474
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G099400 0.5kb upstream 0.5kb upstream 1382 true Chr11: 11017131-11018512 Gossypium raimondii
Gorai.011G099400 0.5kb upstream 0.5kb upstream 500 false Chr11: 11017131-11017630 Gossypium raimondii
Gorai.011G099400 0.5kb downstream 0.5kb downstream 1382 true Chr11: 11017631-11019012 Gossypium raimondii
Gorai.011G099400 0.5kb downstream 0.5kb downstream 500 false Chr11: 11018513-11019012 Gossypium raimondii
Gorai.011G099400 1.0kb upstream 1.0kb upstream 1882 true Chr11: 11016631-11018512 Gossypium raimondii
Gorai.011G099400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11016631-11017630 Gossypium raimondii
Gorai.011G099400 1.0kb downstream 1.0kb downstream 1882 true Chr11: 11017631-11019512 Gossypium raimondii
Gorai.011G099400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11018513-11019512 Gossypium raimondii
Gorai.011G099400 2.0kb upstream 2.0kb upstream 2882 true Chr11: 11015631-11018512 Gossypium raimondii
Gorai.011G099400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11015631-11017630 Gossypium raimondii
Gorai.011G099400 2.0kb downstream 2.0kb downstream 2882 true Chr11: 11017631-11020512 Gossypium raimondii
Gorai.011G099400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11018513-11020512 Gossypium raimondii
Gorai.011G099400 5.0kb upstream 5.0kb upstream 5882 true Chr11: 11012631-11018512 Gossypium raimondii
Gorai.011G099400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11012631-11017630 Gossypium raimondii
Gorai.011G099400 5.0kb downstream 5.0kb downstream 5882 true Chr11: 11017631-11023512 Gossypium raimondii
Gorai.011G099400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11018513-11023512 Gossypium raimondii
Gorai.011G099400 10.0kb upstream 10.0kb upstream 10882 true Chr11: 11007631-11018512 Gossypium raimondii
Gorai.011G099400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11007631-11017630 Gossypium raimondii
Gorai.011G099400 10.0kb downstream 10.0kb downstream 10882 true Chr11: 11017631-11028512 Gossypium raimondii
Gorai.011G099400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11018513-11028512 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028907 5273 Angiosperm View MSA
123832934 5264 Brassicales-Malvales View MSA
124321834 5266 SBM View MSA
124248078 5268 Malvidae View MSA
124073971 5270 Rosid View MSA
123751411 5271 Pentapetalae View MSA
122797516 5272 Eudicot View MSA
121351324 5274 Embryophyte View MSA
123428045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain