Gene : Gorai.011G204200 G. raimondii v2.1
Defline:  (1 of 2) PTHR11254:SF281 - E3 UBIQUITIN-PROTEIN LIGASE UPL6 Genomic Order:  2042
Name:  ? Gorai.011G204200 Secondary Identifier:  ? PAC:26809268
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G204200 0.5kb upstream 0.5kb upstream 11470 true Chr11: 49452029-49463498 Gossypium raimondii
Gorai.011G204200 0.5kb upstream 0.5kb upstream 500 false Chr11: 49452029-49452528 Gossypium raimondii
Gorai.011G204200 0.5kb downstream 0.5kb downstream 11470 true Chr11: 49452529-49463998 Gossypium raimondii
Gorai.011G204200 0.5kb downstream 0.5kb downstream 500 false Chr11: 49463499-49463998 Gossypium raimondii
Gorai.011G204200 1.0kb upstream 1.0kb upstream 11970 true Chr11: 49451529-49463498 Gossypium raimondii
Gorai.011G204200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 49451529-49452528 Gossypium raimondii
Gorai.011G204200 1.0kb downstream 1.0kb downstream 11970 true Chr11: 49452529-49464498 Gossypium raimondii
Gorai.011G204200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 49463499-49464498 Gossypium raimondii
Gorai.011G204200 2.0kb upstream 2.0kb upstream 12970 true Chr11: 49450529-49463498 Gossypium raimondii
Gorai.011G204200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 49450529-49452528 Gossypium raimondii
Gorai.011G204200 2.0kb downstream 2.0kb downstream 12970 true Chr11: 49452529-49465498 Gossypium raimondii
Gorai.011G204200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 49463499-49465498 Gossypium raimondii
Gorai.011G204200 5.0kb upstream 5.0kb upstream 15970 true Chr11: 49447529-49463498 Gossypium raimondii
Gorai.011G204200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 49447529-49452528 Gossypium raimondii
Gorai.011G204200 5.0kb downstream 5.0kb downstream 15970 true Chr11: 49452529-49468498 Gossypium raimondii
Gorai.011G204200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 49463499-49468498 Gossypium raimondii
Gorai.011G204200 10.0kb upstream 10.0kb upstream 20970 true Chr11: 49442529-49463498 Gossypium raimondii
Gorai.011G204200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 49442529-49452528 Gossypium raimondii
Gorai.011G204200 10.0kb downstream 10.0kb downstream 20970 true Chr11: 49452529-49473498 Gossypium raimondii
Gorai.011G204200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 49463499-49473498 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123812567 5264 Brassicales-Malvales Singleton cluster - no MSA
124351218 5266 SBM View MSA
124242854 5268 Malvidae View MSA
124063556 5270 Rosid View MSA
123740343 5271 Pentapetalae View MSA
122788318 5272 Eudicot View MSA
122046917 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121344767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain