Gene : Gorai.011G256000 G. raimondii v2.1
Defline:  (1 of 1) PTHR11946:SF89 - METHIONYL-TRNA SYNTHETASE Genomic Order:  2560
Name:  ? Gorai.011G256000 Secondary Identifier:  ? PAC:26809939
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G256000 0.5kb upstream 0.5kb upstream 5580 true Chr11: 58531548-58537127 Gossypium raimondii
Gorai.011G256000 0.5kb upstream 0.5kb upstream 500 false Chr11: 58531548-58532047 Gossypium raimondii
Gorai.011G256000 0.5kb downstream 0.5kb downstream 5580 true Chr11: 58532048-58537627 Gossypium raimondii
Gorai.011G256000 0.5kb downstream 0.5kb downstream 500 false Chr11: 58537128-58537627 Gossypium raimondii
Gorai.011G256000 1.0kb upstream 1.0kb upstream 6080 true Chr11: 58531048-58537127 Gossypium raimondii
Gorai.011G256000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 58531048-58532047 Gossypium raimondii
Gorai.011G256000 1.0kb downstream 1.0kb downstream 6080 true Chr11: 58532048-58538127 Gossypium raimondii
Gorai.011G256000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 58537128-58538127 Gossypium raimondii
Gorai.011G256000 2.0kb upstream 2.0kb upstream 7080 true Chr11: 58530048-58537127 Gossypium raimondii
Gorai.011G256000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 58530048-58532047 Gossypium raimondii
Gorai.011G256000 2.0kb downstream 2.0kb downstream 7080 true Chr11: 58532048-58539127 Gossypium raimondii
Gorai.011G256000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 58537128-58539127 Gossypium raimondii
Gorai.011G256000 5.0kb upstream 5.0kb upstream 10080 true Chr11: 58527048-58537127 Gossypium raimondii
Gorai.011G256000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 58527048-58532047 Gossypium raimondii
Gorai.011G256000 5.0kb downstream 5.0kb downstream 10080 true Chr11: 58532048-58542127 Gossypium raimondii
Gorai.011G256000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 58537128-58542127 Gossypium raimondii
Gorai.011G256000 10.0kb upstream 10.0kb upstream 15080 true Chr11: 58522048-58537127 Gossypium raimondii
Gorai.011G256000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 58522048-58532047 Gossypium raimondii
Gorai.011G256000 10.0kb downstream 10.0kb downstream 15080 true Chr11: 58532048-58547127 Gossypium raimondii
Gorai.011G256000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 58537128-58547127 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831392 5264 Brassicales-Malvales View MSA
124342754 5266 SBM View MSA
124242853 5268 Malvidae View MSA
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain