Gene : Gorai.011G217400 G. raimondii v2.1
Defline:  (1 of 2) PTHR33921:SF3 - CALVIN CYCLE PROTEIN CP12-3, CHLOROPLASTIC Genomic Order:  2174
Name:  ? Gorai.011G217400 Secondary Identifier:  ? PAC:26807984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G217400 0.5kb upstream 0.5kb upstream 908 true Chr11: 52342410-52343317 Gossypium raimondii
Gorai.011G217400 0.5kb upstream 0.5kb upstream 500 false Chr11: 52342818-52343317 Gossypium raimondii
Gorai.011G217400 0.5kb downstream 0.5kb downstream 908 true Chr11: 52341910-52342817 Gossypium raimondii
Gorai.011G217400 0.5kb downstream 0.5kb downstream 500 false Chr11: 52341910-52342409 Gossypium raimondii
Gorai.011G217400 1.0kb upstream 1.0kb upstream 1408 true Chr11: 52342410-52343817 Gossypium raimondii
Gorai.011G217400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 52342818-52343817 Gossypium raimondii
Gorai.011G217400 1.0kb downstream 1.0kb downstream 1408 true Chr11: 52341410-52342817 Gossypium raimondii
Gorai.011G217400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 52341410-52342409 Gossypium raimondii
Gorai.011G217400 2.0kb upstream 2.0kb upstream 2408 true Chr11: 52342410-52344817 Gossypium raimondii
Gorai.011G217400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 52342818-52344817 Gossypium raimondii
Gorai.011G217400 2.0kb downstream 2.0kb downstream 2408 true Chr11: 52340410-52342817 Gossypium raimondii
Gorai.011G217400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 52340410-52342409 Gossypium raimondii
Gorai.011G217400 5.0kb upstream 5.0kb upstream 5408 true Chr11: 52342410-52347817 Gossypium raimondii
Gorai.011G217400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 52342818-52347817 Gossypium raimondii
Gorai.011G217400 5.0kb downstream 5.0kb downstream 5408 true Chr11: 52337410-52342817 Gossypium raimondii
Gorai.011G217400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 52337410-52342409 Gossypium raimondii
Gorai.011G217400 10.0kb upstream 10.0kb upstream 10408 true Chr11: 52342410-52352817 Gossypium raimondii
Gorai.011G217400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 52342818-52352817 Gossypium raimondii
Gorai.011G217400 10.0kb downstream 10.0kb downstream 10408 true Chr11: 52332410-52342817 Gossypium raimondii
Gorai.011G217400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 52332410-52342409 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123812404 5264 Brassicales-Malvales Singleton cluster - no MSA
124308991 5266 SBM Singleton cluster - no MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain