Gene : Gorai.011G111400 G. raimondii v2.1
Defline:  (1 of 3) 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Genomic Order:  1114
Name:  ? Gorai.011G111400 Secondary Identifier:  ? PAC:26812397
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii RIBOSYN2-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G111400 0.5kb upstream 0.5kb upstream 2282 true Chr11: 13410532-13412813 Gossypium raimondii
Gorai.011G111400 0.5kb upstream 0.5kb upstream 500 false Chr11: 13412314-13412813 Gossypium raimondii
Gorai.011G111400 0.5kb downstream 0.5kb downstream 2282 true Chr11: 13410032-13412313 Gossypium raimondii
Gorai.011G111400 0.5kb downstream 0.5kb downstream 500 false Chr11: 13410032-13410531 Gossypium raimondii
Gorai.011G111400 1.0kb upstream 1.0kb upstream 2782 true Chr11: 13410532-13413313 Gossypium raimondii
Gorai.011G111400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13412314-13413313 Gossypium raimondii
Gorai.011G111400 1.0kb downstream 1.0kb downstream 2782 true Chr11: 13409532-13412313 Gossypium raimondii
Gorai.011G111400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13409532-13410531 Gossypium raimondii
Gorai.011G111400 2.0kb upstream 2.0kb upstream 3782 true Chr11: 13410532-13414313 Gossypium raimondii
Gorai.011G111400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13412314-13414313 Gossypium raimondii
Gorai.011G111400 2.0kb downstream 2.0kb downstream 3782 true Chr11: 13408532-13412313 Gossypium raimondii
Gorai.011G111400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13408532-13410531 Gossypium raimondii
Gorai.011G111400 5.0kb upstream 5.0kb upstream 6782 true Chr11: 13410532-13417313 Gossypium raimondii
Gorai.011G111400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13412314-13417313 Gossypium raimondii
Gorai.011G111400 5.0kb downstream 5.0kb downstream 6782 true Chr11: 13405532-13412313 Gossypium raimondii
Gorai.011G111400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13405532-13410531 Gossypium raimondii
Gorai.011G111400 10.0kb upstream 10.0kb upstream 11782 true Chr11: 13410532-13422313 Gossypium raimondii
Gorai.011G111400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13412314-13422313 Gossypium raimondii
Gorai.011G111400 10.0kb downstream 10.0kb downstream 11782 true Chr11: 13400532-13412313 Gossypium raimondii
Gorai.011G111400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13400532-13410531 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
123812995 5264 Brassicales-Malvales Singleton cluster - no MSA
124309554 5266 SBM Singleton cluster - no MSA
124253090 5268 Malvidae View MSA
124075589 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain