Gene : Gorai.011G174200 G. raimondii v2.1
Defline:  (1 of 4) PTHR23382//PTHR23382:SF7 - MALATE DEHYDROGENASE Genomic Order:  1742
Name:  ? Gorai.011G174200 Secondary Identifier:  ? PAC:26808203
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLUCONEO-PWY Gossypium raimondii pathologic  
Graimondii GLYOXYLATE-BYPASS Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PWY-561 Gossypium raimondii pathologic  
Graimondii PWY-5690 Gossypium raimondii pathologic  
Graimondii PWY66-399 Gossypium raimondii pathologic  
Graimondii PWY-7115 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G174200 0.5kb upstream 0.5kb upstream 4298 true Chr11: 39503476-39507773 Gossypium raimondii
Gorai.011G174200 0.5kb upstream 0.5kb upstream 500 false Chr11: 39507274-39507773 Gossypium raimondii
Gorai.011G174200 0.5kb downstream 0.5kb downstream 4298 true Chr11: 39502976-39507273 Gossypium raimondii
Gorai.011G174200 0.5kb downstream 0.5kb downstream 500 false Chr11: 39502976-39503475 Gossypium raimondii
Gorai.011G174200 1.0kb upstream 1.0kb upstream 4798 true Chr11: 39503476-39508273 Gossypium raimondii
Gorai.011G174200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 39507274-39508273 Gossypium raimondii
Gorai.011G174200 1.0kb downstream 1.0kb downstream 4798 true Chr11: 39502476-39507273 Gossypium raimondii
Gorai.011G174200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 39502476-39503475 Gossypium raimondii
Gorai.011G174200 2.0kb upstream 2.0kb upstream 5798 true Chr11: 39503476-39509273 Gossypium raimondii
Gorai.011G174200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 39507274-39509273 Gossypium raimondii
Gorai.011G174200 2.0kb downstream 2.0kb downstream 5798 true Chr11: 39501476-39507273 Gossypium raimondii
Gorai.011G174200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 39501476-39503475 Gossypium raimondii
Gorai.011G174200 5.0kb upstream 5.0kb upstream 8798 true Chr11: 39503476-39512273 Gossypium raimondii
Gorai.011G174200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 39507274-39512273 Gossypium raimondii
Gorai.011G174200 5.0kb downstream 5.0kb downstream 8798 true Chr11: 39498476-39507273 Gossypium raimondii
Gorai.011G174200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 39498476-39503475 Gossypium raimondii
Gorai.011G174200 10.0kb upstream 10.0kb upstream 13798 true Chr11: 39503476-39517273 Gossypium raimondii
Gorai.011G174200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 39507274-39517273 Gossypium raimondii
Gorai.011G174200 10.0kb downstream 10.0kb downstream 13798 true Chr11: 39493476-39507273 Gossypium raimondii
Gorai.011G174200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 39493476-39503475 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832560 5264 Brassicales-Malvales View MSA
124339900 5266 SBM View MSA
124244988 5268 Malvidae View MSA
124064013 5270 Rosid View MSA
123739138 5271 Pentapetalae View MSA
122789281 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain